Variovorax sp. PMC12: C4F17_04620
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Entry
C4F17_04620 CDS
T05380
Name
(GenBank) isovaleryl-CoA dehydrogenase
KO
K09456
putative acyl-CoA dehydrogenase
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99983 Lipid metabolism
C4F17_04620
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GFIT
Motif
Pfam:
AidB_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
LTXXQ
Motif
Other DBs
NCBI-ProteinID:
AVQ80294
UniProt:
A0A2P1V534
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Position
1:1003263..1004903
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AA seq
546 aa
AA seq
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MDTTHEVFNQPTPLVDYNLFDTNRPLRDALKFNAPALQTTQLHELGATLGSAGMQAHARL
ANIHTPELHTHDRFGRRVDEVEFHPSYHALMSAAVGAGLHGTPWTGASASPHVLRAAGFM
LFTELEPSILCPISMTYAVTPALRGNAGVYADWGPKLGSLRYDPALKRFSDKPGVTMGMG
MTEKQGGSDVRANTTRAVRDGSDAWGERYAITGHKWFFSAPMCDAFLVLAQAPAGLSCFF
LPRVLPDGTRNAIQIQRLKDKLGNKANASSEVEFQGASAWLVGEEGRGIPQILEMGTMTR
LDCALGTSGLMRQSLGIALNHATQRNAFGKPLIDQPLMKNVLADLALESEAATALAIRLA
RAFDRQDDEHERLMARLLTPVAKFWICKRGSHFAQEAMECLGGNGYVEEGGEGIMARIYR
EMPLNSIWEGAGNIMALDLLRGLRKGDAIAALRKELAPARGQHAALDRLADAMPARIEAM
ASETEARRLAQDVALAVQASLLAQTAPAAVAGAFCASRLGGDWGNAFGTLGAGTDFDSII
QRAQPR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgcacgaggtattcaaccagcccacgccgctggtggactacaacctcttc
gataccaaccggccgcttcgcgatgcgctgaagttcaacgcgcccgcgctgcagaccacg
cagctgcatgaactgggcgcgaccctcggctcggccggcatgcaggcgcatgcgcggctg
gccaacatccacacgcccgagctgcacacgcatgaccgcttcggccggcgcgtcgacgag
gtggaattccatccgagctatcacgcgctgatgagcgccgccgtgggcgcggggctgcac
ggcacgccgtggaccggcgcctcggcgtcgccgcatgtgctgcgcgcggccggcttcatg
ctcttcaccgaactggagccgtcgattctctgccccatctccatgacctacgccgtcacg
cccgcgctgcgcggcaatgccggcgtgtacgccgactggggacctaagctcggcagcctc
cggtacgacccggcgctcaagcgcttcagcgacaagcccggcgtgaccatgggcatgggc
atgaccgagaagcagggcggctccgacgtgcgggccaacaccacccgggccgtgcgcgac
ggcagcgacgcctggggcgagcgctacgccatcaccggccacaagtggttcttctcggcg
ccgatgtgcgatgcgttcctggtgctggcgcaggcgccggccgggctcagctgcttcttc
ctgccgcgcgtgctgcccgacggcacgcgcaacgccatccagatccagcgcctgaaggac
aagctgggcaacaaggccaacgccagttccgaggtcgagttccagggcgccagcgcctgg
ctggtgggcgaggaggggcgcggcattccgcagatcctcgagatgggcacgatgacccgg
ctcgactgcgcgctgggcaccagcggcctgatgcgccagtcgctgggcatcgcgctcaac
catgcgacgcagcgcaacgccttcggcaagcccctgatcgaccagccgctcatgaagaac
gtgctggccgatctcgcgctcgaaagcgaagccgccacggcgctggccattcgcctcgcg
agagccttcgatcgccaggacgacgagcacgagcgcctgatggcccgcctgctcacgccc
gtcgccaagttctggatctgcaagcgcggcagccacttcgcgcaggaggccatggaatgc
ctcggcggcaacggctatgtggaagagggcggcgaaggcatcatggcccgcatctaccgc
gagatgccgctcaactccatctgggaaggcgccggcaacatcatggcgctcgacctgctg
cgcggcctgcgcaagggcgacgcgattgccgcgctgaggaaggaactggcgcccgcgcgc
ggccagcacgcggcgctcgaccgtcttgccgatgcgatgcccgcacgcatcgaggcgatg
gcctccgaaacagaggcgcgccgcctggcacaggacgtggcattggccgtgcaggcatcg
ctgctcgcgcagaccgcaccggcggcggtggccggtgccttctgcgcatcgcgcctcggc
ggcgactggggcaacgccttcggcacgctcggcgccggcaccgatttcgattcgatcatc
cagcgcgcgcagccccgttga
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