Variovorax sp. PMC12: C4F17_06465
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Entry
C4F17_06465 CDS
T05380
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_06465
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_06465
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
C4F17_06465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
MarR_2
HTH_24
HTH_11
Sigma70_r4
TrmB
Motif
Other DBs
NCBI-ProteinID:
AVQ80624
UniProt:
A0A2P1V610
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All DBs
Position
1:1402182..1402901
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AA seq
239 aa
AA seq
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MDDPILTIEEREAINSGRWFSSLSPSLRHDILRCAFVKRYKDGDLIAARGDPPDHWIACA
KGAVRVSSTAVSGKQVTLTYVEPGIWFGDVAMFDGDRRTHDTYSHGDSTILCVARADFQK
ILASHVELYEALMRLQARRIRTLFGLVEDLNTLPLRARLAKQLIHLVRSYGVPNLDDGSQ
MRIGLQLAQEELAQLLGASRQRVNQELKTMEREGTIRIEPGGLVVLDRAALMRVSEAES
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccccattcttaccatcgaagaacgtgaagcgatcaacagtggtcgctggttt
tcttccctatctccatcgctacggcacgacatcctccgatgtgctttcgtcaaacgctac
aaggacggcgacctgatcgccgcccgcggcgacccgcccgatcactggatcgcctgcgcc
aagggcgcggtgcgcgtcagctcgacggcggtctccggcaagcaggtgacgctgacctac
gtggagccgggcatctggttcggcgacgtggcgatgttcgacggggaccggcgcacgcac
gacacctactcgcacggcgacagcaccattctttgcgtggcgcgcgccgatttccagaag
atcctggcgtcgcacgtggagctgtacgaagcgctgatgcggctgcaggcgcgccgcatc
cgcacgctgttcgggctggtggaagacctcaacaccctgcccctgcgggcgcggctggcc
aagcagctcatccacctggtgcgcagctacggcgtgcccaacctggacgacggcagccag
atgcgcatcggcctgcagctggcgcaggaagaactggcgcagctgctgggcgcatcgcgc
cagcgggtcaaccaggaactcaagacgatggagcgcgagggcaccatccggatcgagccg
ggcggcctggtcgtgctggatcgcgcggccttgatgcgcgtctcggaagctgaaagctag
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