KEGG   Variovorax sp. PMC12: C4F17_13710
Entry
C4F17_13710       CDS       T05380                                 
Name
(GenBank) ABC transporter permease
  KO
K02033  peptide/nickel transport system permease protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_13710
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_13710
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    C4F17_13710
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N
Other DBs
NCBI-ProteinID: AVQ81929
UniProt: A0A2P1V9S0
LinkDB
Position
1:complement(2925810..2926790)
AA seq 326 aa
MIAFVLRRLIQAVIVMVAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPF
FVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTA
LRRGTFLSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWSSGLF
SVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF
VVINLVVDLLYFVVDPRLRVGKAGGH
NT seq 981 nt   +upstreamnt  +downstreamnt
atgattgccttcgtactgcgccgcctgatccaggccgtgatcgtgatggtcgcggtcgcg
ttcatcgccttcctcttgttccaatatgtcggtgatcccgtcgtgttcctcctggggcag
gacgcgaagcccgaccagatccgtgaattgcgcgccgcattggggctcgaccagcccttc
ttcgtgcagttctggcacttcctggtcaatgccgcccaaggcgagttcgggctgagcctg
cgccagggcgcgaaggtgtcgcgcctgatcggcgagcgcttcccggccacgctcgaactg
gcgctcgtggctgccgtgctggcgctgttcatcggcattccgatgggtgtctacaccgca
ctgcgccggggcaccttcctgagccagttcttcatgacggtgtcgctgctcggcgtgtcg
ctgcccacattcctgatcggcatcctgctgatcctcgtctttgccgtgacgctgggctgg
ttcccgagcttcgggcgcggcgagaccgtcaagttcggctggtggagcagcggtctcttc
agcgtcgacggctggcagcacatcgtgctgccggcggtgacgctggcgatcttccagctc
acgctcatcatgcggttggtgcgcgccgagatgctcgaagtgctgcgcaccgactacatc
aagttcgcgcgcgcccgcggcctgtcgaaccgcgcgatacatttcggccatgcgctcaag
aacacgctggtgcccgtgatgaccatcaccggcctgcagctcggcggcctcatcgccttt
gcgatcatcaccgagtcggtgttccagtggcccggcatgggcctgctgttcatccaggcc
gtgaccttcgccgacattccggtgatggccgcctacctgtgcctgattgccttgatcttc
gtggtgatcaacctcgtggtcgacctgctgtacttcgtggtcgatccgcggctgcgcgtc
ggcaaggcgggagggcactga

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