Variovorax sp. PMC12: C4F17_13710
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Entry
C4F17_13710 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K02033
peptide/nickel transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_13710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_13710
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C4F17_13710
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
AVQ81929
UniProt:
A0A2P1V9S0
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All DBs
Position
1:complement(2925810..2926790)
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AA seq
326 aa
AA seq
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MIAFVLRRLIQAVIVMVAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPF
FVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTA
LRRGTFLSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWSSGLF
SVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK
NTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF
VVINLVVDLLYFVVDPRLRVGKAGGH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgattgccttcgtactgcgccgcctgatccaggccgtgatcgtgatggtcgcggtcgcg
ttcatcgccttcctcttgttccaatatgtcggtgatcccgtcgtgttcctcctggggcag
gacgcgaagcccgaccagatccgtgaattgcgcgccgcattggggctcgaccagcccttc
ttcgtgcagttctggcacttcctggtcaatgccgcccaaggcgagttcgggctgagcctg
cgccagggcgcgaaggtgtcgcgcctgatcggcgagcgcttcccggccacgctcgaactg
gcgctcgtggctgccgtgctggcgctgttcatcggcattccgatgggtgtctacaccgca
ctgcgccggggcaccttcctgagccagttcttcatgacggtgtcgctgctcggcgtgtcg
ctgcccacattcctgatcggcatcctgctgatcctcgtctttgccgtgacgctgggctgg
ttcccgagcttcgggcgcggcgagaccgtcaagttcggctggtggagcagcggtctcttc
agcgtcgacggctggcagcacatcgtgctgccggcggtgacgctggcgatcttccagctc
acgctcatcatgcggttggtgcgcgccgagatgctcgaagtgctgcgcaccgactacatc
aagttcgcgcgcgcccgcggcctgtcgaaccgcgcgatacatttcggccatgcgctcaag
aacacgctggtgcccgtgatgaccatcaccggcctgcagctcggcggcctcatcgccttt
gcgatcatcaccgagtcggtgttccagtggcccggcatgggcctgctgttcatccaggcc
gtgaccttcgccgacattccggtgatggccgcctacctgtgcctgattgccttgatcttc
gtggtgatcaacctcgtggtcgacctgctgtacttcgtggtcgatccgcggctgcgcgtc
ggcaaggcgggagggcactga
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