KEGG   Variovorax sp. PMC12: C4F17_16035
Entry
C4F17_16035       CDS       T05380                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_16035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_16035
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_16035
SSDB
Motif
Pfam: Phage_GPD Phage_base_V Gp5_C DUF6484
Other DBs
NCBI-ProteinID: AVQ82338
UniProt: A0A2P1VAZ1
LinkDB
Position
1:complement(3447619..3449964)
AA seq 781 aa
MADHKFSIQGDSPVVDKLMFWRIVGHEVLARPSAYELTVLTDNESIEAADVLGRSFDVVI
EFADADGGTHKRHCQGHAVRFTRVAQSGRFLEYRISLRSWFWLLSKRVNARILQNKPVLG
VIDAVLDDSPVGSLKKLKAGGVVGPHEPHVYCVQYRESDYQFLSRLLEEEGIYYWFDAHD
APGTLYLSDTSTLAHEKLPAADTLNHVQRGASEGRFNEITRWISSRQFESGKFASRDRDF
KVISKQLRADKGDPDTHELSDLEVFEFPGGYQSGDDTDNLAQLRLDELIGRRQRHWALTG
WPDVTAGRSFAFKGDPDGKRDGDYLIAACTFVASHPGYEGANFPESRRSIDAVLHDALAD
DPVNTGLGELVGDLIAQTPALSTGQRASSSFLLTVIPLNTPWRPPRLTPRVTMPGPQSAI
VTGRSGEQIWTEEHGRVKVQFHWDRYGKNDENSSCWVRVSHPWAGKSWGAVSIPRIGQEV
IVDFLDGDPDQPIIVGRFYNGESMAPFGLPAGAVVSGIKSNTHKGKGYNELSMDDTAGKE
KVTIHGQYDMNTTVEHNQTTTVHNSRTDTVDVDDSESVGNNQTQHVGVNQTISIGSNRGE
TVGGTETITITGHRTETVNGGETVTVTGGRSHTVNGMQTTTISVAEAHTVGAGRMHSVGA
GEAINVGGVQTVSVGGAQMVSVGGVQKVNVGALQSITVGGPHKLSAAVIAETSKGPIKIK
AGAICMVEAPTIMLKAGGSKIVMNASGITIKGAKITIKADGTASFKAGGSIKIKGSNLGE
D
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggccgatcacaagttcagcatccagggcgattcgcccgtagtcgacaagctcatgttc
tggcgcatcgtgggccacgaggtgctggcgcgcccgtcggcctacgaactcaccgtgctg
acagacaacgaaagcatcgaagccgcggacgtgctgggccgctccttcgacgtcgtgatc
gagttcgccgacgccgacggcggcacccacaagcggcactgccaggggcatgcggtgcgc
ttcacgcgcgtggcgcagagcgggcgtttcctcgaataccgcatcagcctgcgctcgtgg
ttctggctgctgagcaagcgcgtcaacgcgcgcatcctgcagaacaagccggtgctgggc
gtgatcgatgcggtgctcgacgacagcccggtcggcagcctcaagaagctcaaggcgggc
ggcgtggtcggcccgcatgagccccacgtgtactgcgtgcaataccgcgagagcgattac
cagtttctttcgcgccttctggaagaagagggcatctactactggttcgacgcgcacgac
gcgccgggcaccctgtacctttcggacaccagcacgctggcgcacgagaagctgcccgcc
gccgacacgctgaaccacgtgcagcgcggcgcatcggaagggcgcttcaacgagatcacg
cgctggatcagctcgcgccagttcgaatcgggcaagttcgcgtcgcgcgaccgggacttc
aaggtcatcagcaagcagctgcgcgccgacaagggcgaccccgacacgcacgagctgtcg
gacctcgaagtgttcgagttcccgggcggctaccagtcgggcgacgacaccgacaacctc
gcgcagctgcggctcgacgaactcatcggccggcgccagcgccactgggcgctgaccggc
tggcccgacgtgaccgccgggcgcagcttcgccttcaagggcgaccccgacggcaagcgc
gacggcgactacctgatcgcggcgtgcaccttcgtcgcgagccaccccggctacgaaggc
gccaacttccccgagagccggcgctcgatcgacgcggtgctgcacgacgcgctggccgac
gaccccgtcaacaccgggctgggcgaactggtgggcgacctgatcgcgcagacgcccgcg
ctgagcaccggccagcgcgcgagcagcagcttcctgctcacggtgattccgctgaacacg
ccctggcgcccgccgcgcctgacgccgcgcgtgaccatgcccggcccgcagagcgccatc
gtcacgggccgcagcggcgagcagatctggaccgaggagcacggccgcgtgaaggtgcag
ttccactgggaccgctacggcaagaacgacgagaacagctcatgctgggtgcgcgtgtcg
catccctgggccggcaagagctggggcgcggtcagcattccgcgcatcggccaggaagtg
atcgtcgatttcctggacggcgaccccgaccagcccatcatcgtcgggcgcttctacaac
ggcgaatcgatggcgcccttcggcctgccggccggcgccgtggtgagcggcatcaagtcg
aacacgcacaagggcaagggctacaacgaactgtcgatggacgacaccgccggcaaggag
aaggtgaccatccacggccagtacgacatgaacaccacggtggagcacaaccagacgacc
accgtgcacaacagccgcaccgacaccgtcgacgtggacgattcggagagcgtgggcaac
aaccagacgcagcacgtgggcgtcaaccagaccatctccataggctccaaccgcggcgag
accgtgggcggcaccgagaccatcaccatcaccgggcatcgcaccgagaccgtgaacggc
ggcgagaccgtcaccgtgaccggcgggcgcagccacaccgtcaacggcatgcagaccacc
accatctcggtggcggaggcgcacaccgtgggggcgggccgcatgcacagcgtgggcgcg
ggcgaggccatcaatgtgggcggcgtgcagaccgtgtcggtgggcggcgcgcagatggtg
agcgtgggcggcgtgcagaaggtcaacgtgggcgcgctgcagtcgatcacggtcggcggc
ccgcacaagctctcggcggcggtgatcgccgagacatcgaaggggccgatcaagatcaag
gcgggcgcgatctgcatggtcgaggcgcccaccatcatgctcaaggcgggcggcagcaag
atcgtcatgaacgccagcggcatcaccatcaagggcgccaagatcaccatcaaggccgac
ggcaccgcgtcgttcaaggccggcggctcgatcaagatcaagggctccaacctgggggag
gactga

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