Variovorax paradoxus S110: Vapar_1949
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Entry
Vapar_1949 CDS
T00916
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_1949
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Vapar_1949
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GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_31
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACS18596
UniProt:
C5CVE7
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Position
1:2088082..2089137
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AA seq
351 aa
AA seq
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MRDNPSPPADARRARVVDIARAAQVSTATVDRVLNRRPGVRDATVQRVLKAAGELDYLPG
PELYAALTPPPLRLVFLLPAGTNRFIRMLGDMVGYSQEHWAPFNVQCRTVFIESFNPHEL
ADALRKHGQRCDGIAMMALEHPAVREAVAALAARGLPVVTLISDLSNSERAAFVGLDNRA
AGRTAGYLIGRFIGARAAKVALIAGSLSYKAHEEREAGFLHVIDEMFPRLEVVGLREGQD
DAGKNYRQTRALLEQYPDMGGIYNIGGASDGVARALKEAGREQKVVFIGHGLTPDTRTLL
IDGSMDAVITQSPHTTLMSCVRIFANLRDGREALSGVETTRSQVIFRENLP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgggataacccttcacctcctgccgatgcgcggcgtgcgcgcgtggtcgacatcgcg
cgggccgcgcaggtgtcgaccgccacagtcgaccgcgtgctcaaccgccgccccggcgtg
cgcgacgccacggtgcagcgcgtgctcaaggccgcgggcgagctcgactacctgccgggc
cccgagctctatgccgcgctcacgccgccgccgctcaggctggtgttcctgctgccggcc
gggaccaaccgcttcatccgcatgctgggcgacatggtgggctattcacaggagcactgg
gcgccgttcaacgtgcagtgccgcaccgtcttcatcgagagcttcaatccgcacgagctg
gcggacgcgttgcgcaagcatggccagcgttgcgacggcatcgcgatgatggcgctggag
cacccggcggtgcgcgaggcggtggcggcgctggcggcgcgcgggctgccggtggtcacg
ctgatctccgacctgtcgaactccgagcgcgccgccttcgtggggctggacaaccgcgcg
gccggccgcaccgcgggctacctcatcggccgcttcatcggtgcgcgcgccgcaaaggtc
gcgctcatcgcgggcagcctgagctacaaggcccatgaagagcgcgaggccggcttcctg
cacgtgatcgacgagatgttccctcggctcgaggtggtgggcctgcgcgaagggcaggac
gatgccggcaagaactaccggcagacacgcgcgctgctggagcagtaccccgacatgggc
ggcatctacaacatcggcggtgcgtccgacggcgtggcgcgcgcgctgaaggaggcgggg
cgcgagcagaaagtggtgttcatcggacacgggctcacgcccgacacgcgcacgctgctg
atcgacggcagcatggacgcggtgatcacgcagagcccgcacaccacgctgatgagctgc
gtgcgcatctttgccaacctgcgcgacgggcgcgaggcgctcagcggcgtggaaaccacc
cgcagccaggtgatcttccgcgagaacctgccctag
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