Variovorax paradoxus S110: Vapar_3964
Help
Entry
Vapar_3964 CDS
T00916
Name
(GenBank) Aspartyl/Asparaginyl beta-hydroxylase
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Vapar_3964
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Vapar_3964
Lipopolysaccharide biosynthesis proteins [BR:
vap01005
]
Lipid A
Vapar_3964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ACS20578
UniProt:
C5CVS5
LinkDB
All DBs
Position
1:complement(4207866..4208762)
Genome browser
AA seq
298 aa
AA seq
DB search
MKWVILAIFALSALYVHFRGQVRHRFFRQLSDHSTFLAPLNAFMYIFSKVPSTPYLSPAQ
FPEMRVLEENWQVIREEALAMRNGGSIKASSQFNDVGFNSFFKSGWKRFYLKWYDEAHPS
AAVLCPRTTELLKGIGTIKAAMFAELPPGSRLVRHRDPFAGSLRYHLGLWTPGVEGCYID
VDGQRYHWRDGEAVVFDETYIHYAENTTDHDRVILFCDIERPLKYRWASAVNRWFAKNLL
AAAASPNDAGDKTGGINRAFKYIYQIRVIGKRLKAWDKRVYYLVKWAIFGGLALWIFW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtcattcttgccatcttcgcgctcagcgcgctctacgttcatttccgcggc
caggtccggcatcgtttcttcaggcagctgtctgatcactcgaccttcctcgcgccgctg
aacgccttcatgtacatcttctcgaaggtgccgagcacgccgtacctgtcgcccgcgcaa
tttcccgagatgcgcgtgctcgaggaaaactggcaggtcatccgcgaagaggcgctcgcc
atgcgcaacggcggcagcatcaaggcgtcgagccagttcaacgacgtgggcttcaactcc
ttcttcaagagtggctggaagcgcttctacctcaagtggtacgacgaggcgcatccctcg
gccgccgtgctgtgcccccgcacgaccgagctgctcaagggcatcggcaccatcaaggcg
gccatgttcgccgagctgccgccgggcagccgcctggtgcgccaccgcgaccccttcgcc
ggttcgctgcgctaccacctgggcctgtggacgccgggcgtggagggctgctacatcgac
gtggacggccagcgctaccactggcgcgacggcgaggccgtggtgttcgacgaaacctac
atccactacgccgagaacacgaccgaccacgaccgcgtgatcctgttctgcgacatcgag
cgtccgctcaagtaccgctgggccagcgccgtgaaccgctggttcgccaagaacctgctg
gcggcggccgcctcgcccaatgatgccggcgacaagacggggggcatcaaccgcgcgttc
aagtacatctaccagatccgcgtgatcggcaagcggctcaaggcctgggacaagcgggtg
tactacctcgtgaagtgggccatcttcggcgggctggcgctctggatcttctggtaa
DBGET
integrated database retrieval system
