Variovorax paradoxus S110: Vapar_4254
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Entry
Vapar_4254 CDS
T00916
Name
(GenBank) outer membrane protein assembly complex, YaeT protein
KO
K07277
outer membrane protein insertion porin family
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vap03029
]
Vapar_4254
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4254
Mitochondrial biogenesis [BR:
vap03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Vapar_4254
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_4254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
ACS20867
UniProt:
C5CY11
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All DBs
Position
1:4494691..4497093
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AA seq
800 aa
AA seq
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MSPSKPASVLAALLLSIACAPAWAADPFTVGDIRLEGLQRVEPGTVFATLGIRAGDTYSD
ERGSAAIRSLFELGLFKDVRIDINGSVLVVIVEERPSIADVDFVGTKEFDKAALQKALRS
VGLAEGQPYDKALADRAEQELKRQYISRSLYSAQVVTTVTPLERNRVNLTFSVTEGESAR
IKEVRVVGNQAFGESTLLDLFDQDSGGWLSWYTKSNQYSRSKFNGDLETLRSFYVTRGYL
EFRIDSTQVAMSPDRETLTLTVNITEGQKFAVAGVKLAGNYLGREDEFKSLVTIRPGQPY
NGEDVNATTRAFTDYFGSFGYAFARVKAEPEIDRDNNRVTLVLRAEPSRRAYVRRLNIGG
NARTRDEVIRREFRQYEGAWYDGNKIKLSRDRVDRLGFFTDVNIETTEVPGSPDLVDLAI
NVTEKPTGSLQLGAGYSSTDKVSLSFGITQENVFGTGNYLGLQVNTSSYNRTISLTATDP
YFTPGGISRTFNVFHTTTRPYYQADGNYKLASDGGSVRFGLPLGELDTVYLGIGVERYSF
TPGTNGAYTLVDGSYVYTGTPQAYLDYFQCTGTAPSVVCASRNMVGIPATIGWARDDRDS
ALVPTTGRLQSANLEVGVGSELRYLKSTYQYQQYFALSKQYTLAVNGQLGYAKALGGTAY
PIFKNFYAGGLGSIRGFEQNSLGPVDAVTGGALGGTRKAIFNMEFSTPFPGAGNDRSLRL
YTFFDAGNVFAERTASMTDAQWKAQNRLRASAGVGISWISPLGPLRLAYAVPLVYQKLDE
ANGIAADRTQRFQFQIGTSF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttccaagcccgcctccgtccttgccgccctgctcctctcgatcgcctgcgcg
cccgcctgggccgccgatccgttcaccgtcggggacatccggctcgagggcctgcagcgc
gtggagccgggaacggtgtttgccacgctcggcatcagggcgggcgacacctacagcgac
gagcgcggcagcgcagccatccgctcgctgttcgagctcggcctcttcaaggacgtgcgc
atcgacatcaatggcagcgtgctggtggtgatcgtcgaggaacgcccgtcgattgccgac
gtcgacttcgtcggcaccaaggaattcgacaaggccgcgctccagaaggcactgcgcagc
gtgggcctggccgaaggccagccctacgacaaggcgctggccgaccgcgcggagcaggaa
ctcaagcggcagtacatcagccggagcctctacagcgcgcaagtcgtcaccaccgtgacg
ccgctggagcgcaaccgcgtcaacctgactttcagcgtgaccgagggcgagtccgcgcgc
atcaaggaagtgcgcgtggtcggcaaccaagccttcggcgaaagcaccctgctcgatctg
ttcgaccaggacagcggcggctggctgagctggtacaccaagtcgaaccagtattcgcgc
agcaagttcaacggcgacctggagacgctgcgctccttctacgtcacgcgcggctacctg
gagttccgtatcgactccacgcaggtcgccatgtcgccggaccgggagacgctcacgctc
acggtcaacatcaccgaaggacagaagttcgcggtggccggcgtcaagctcgcgggcaac
tacctgggacgcgaagacgagttcaagtcgctcgtgacgatccgccccggccagccctac
aacggcgaagacgtgaacgccaccacccgggccttcaccgactatttcggcagcttcggc
tatgccttcgcacgcgtcaaggcagaacccgagatcgaccgcgacaacaaccgcgtcacg
ctggtgctgcgggccgaaccttcacggcgcgcctacgtgcggcgcctgaacatcgggggc
aacgcaagaacgcgcgacgaagtcatccgccgcgaattccggcagtacgagggcgcctgg
tacgacggcaacaagatcaagctctcgcgcgaccgcgtggaccggctcggcttcttcacc
gacgtgaacatcgagaccaccgaggtgccgggctcgcccgacctggtcgacctggcgatc
aacgtgaccgagaagcccaccggttcgctgcagctcggcgcgggctactcgtcgaccgac
aaggtgtcgctgagcttcggcatcacgcaggagaacgtgttcggcacgggcaactacctg
ggcctgcaggtcaacacgagctcgtacaaccgcaccatctccctcacggccaccgacccg
tacttcacgccgggcggcatctcgcgcaccttcaatgtgttccacaccaccacccgcccc
tactaccaggcagacggcaactacaagctcgcgagcgatggcggctcggtgcgcttcggg
ctgccgctcggggagctggacacggtctacctgggcatcggcgtggagcgctacagcttc
acgccgggcaccaacggcgcctacacgctggtcgacggctcctacgtgtacacgggcacg
ccgcaggcctacctcgactacttccagtgcacgggcacggcgccaagcgtggtgtgcgca
tcgaggaacatggtgggcattcccgcgaccatcggctgggcgcgcgacgaccgcgacagc
gcgctggtgcccaccaccggccggctgcagagcgccaacctggaggtgggcgtgggcagc
gagctgcgctacctgaagagcacctaccagtaccagcagtacttcgcgctgtccaagcag
tacacgctggccgtcaacggccagctcggctatgccaaggcgctgggcggaaccgcgtac
cccatcttcaagaacttctatgcgggcgggctcggctcgatccgcggcttcgagcagaac
tcgctcgggccggtcgatgcggtcacgggcggtgcgctcggcggcacgcgcaaggccatc
ttcaacatggagttcagcacgcccttcccgggcgcgggcaacgaccggtcgctgcggctg
tacaccttcttcgatgccggcaacgtgtttgccgagcgcaccgcgagcatgaccgatgcg
cagtggaaggcgcagaaccgcctgcgcgcctcggccggggtgggcatcagctggatttcc
ccgctcggcccgctgcgcctggcctatgcggtgccgctcgtgtaccaaaagctcgacgaa
gccaacggcattgcggcggaccggacgcagcgcttccagttccagatcggcacctcgttc
tga
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