Variovorax paradoxus S110: Vapar_4346
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Entry
Vapar_4346 CDS
T00916
Name
(GenBank) ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
KO
K02897
large subunit ribosomal protein L25
Organism
vap
Variovorax paradoxus S110
Pathway
vap03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Vapar_4346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vap03011
]
Vapar_4346
Ribosome [BR:
vap03011
]
Ribosomal proteins
Bacteria
Large subunit
Vapar_4346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
Motif
Other DBs
NCBI-ProteinID:
ACS20957
UniProt:
C5CYZ6
LinkDB
All DBs
Position
1:4593144..4593818
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AA seq
224 aa
AA seq
DB search
MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGKPQLIELDHNALWHALKKEAFHSSIL
EMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLHYKGEEESDAVKLDH
NLVTHVMTELEVSCLPADLPEFIEVDLSGLKKNATLHVNDIKLPKGVKFVSHGKLNPVIV
SAVPPLVSEEPAPAAEGAAPAEGAAAAAAGGKPAAKTAKPAAKK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtcgcttttgagcgcgccaagcagggcacgggtgcgagccgccgtctccgc
atctcgggcaagacgcccggtatcgtctatggtggtgaaggcaagccccagttgatcgag
ctcgatcacaacgcgctgtggcacgccctcaaaaaggaagccttccactcgtcgatcctc
gaaatggaactcggcggcgccaccagcaaggtgctgctgcgcgacgtgcagtaccacccg
ttccgccagctggtgcagcacatcgacttccagcgcgtggacgccaagacccgcatgcac
atgaaggtgccgcttcactacaagggtgaagaagagtccgacgccgtcaagctcgaccac
aacctcgtgacgcacgtcatgaccgaactcgaagtgagctgcctgccggccgacctcccc
gagttcatcgaagtggacctctcgggcctcaagaagaacgccacgctgcacgtcaacgac
atcaagctgcccaagggcgtgaagttcgtgagccacggcaagctgaacccggtcatcgtg
tcggccgtgccgccgctggtctccgaagagccggcacccgccgccgagggcgcagcacct
gccgaaggcgcagcagcagcagcagccggtggcaagcctgccgccaagacggcaaagccc
gccgcgaagaagtaa
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