Vigna angularis (adzuki bean): 108342709
Help
Entry
108342709 CDS
T04660
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00730
Thiamine metabolism
var01100
Metabolic pathways
var01240
Biosynthesis of cofactors
Module
var_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
108342709
Enzymes [BR:
var01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
108342709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
108342709
NCBI-ProteinID:
XP_017435992
UniProt:
A0A0L9VC25
LinkDB
All DBs
Position
9:complement(16692213..16698268)
Genome browser
AA seq
650 aa
AA seq
DB search
MASVHANVTSLVCKNGNHASQSKFPSSTFLPGFDVVGRVSSAWKKELVPPSMTLVPRATL
TFDPPTTNSDKTNQKKHTIDPASPDFLPLPSFEQCFPKSTKEHREVTHEETGHVLKIPFR
RVHLSGEEGHFDTYDTSGPQNINPRIGLPKLRQEWVDRRQKIGPPRFTQMYYAKQGIITE
EMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVAS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSSVPVGTVPIYQALEKVNGIA
ENLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKCHPHAQAWDDALSKARFEF
RWMDQFALSLDPMTAMAFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEKYGYG
TAEEALQRGMDAMSAEFQAAKKTISGEQHGEAGGEIYLPEAYVNSKERTA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgcatgctaatgtgacatcacttgtttgcaagaatggcaaccatgcttct
caatcgaaatttccaagttctacattcttgcctggatttgatgttgttggacgtgtttca
agtgcttggaagaaggaacttgttccaccttccatgaccttggtacctagagccacatta
acatttgatcctccaactaccaattcagacaaaaccaatcaaaagaagcacactattgac
cctgcttctcctgattttcttccccttccttcctttgaacagtgctttccaaagagcact
aaagaacacagggaagtgactcatgaagaaactggtcatgtgctcaaaattccctttcgt
agagttcacctctctggggaggaaggacactttgatacctatgacactagtggtccccaa
aatataaaccccaggataggactcccaaaattgcgtcaagagtgggttgacaggaggcag
aaaataggtccaccaagatttactcagatgtactatgccaagcagggaattatcactgag
gagatgctttattgtgccgctcgtgagaagcttgacccagagtttgtgaggtcagaagtt
gctcgtggacgtgctatcattccttccaacaaaaaacacttggagttagagcccatgatt
gttggaagaaactttttggtgaaagtaaatgccaatattggaaattctgcagttgctagc
tccatagaagaggaggtttacaaggttcagtgggcaactatgtggggagctgatacagtc
atggatctctcaactggtcgccacatccacgaaactcgagagtggatcttacgcaactcc
tctgtaccagttggaactgtacctatttatcaagcacttgaaaaagttaatggaattgct
gaaaatcttacctgggaggttttcagggacaccctgattgaacaagctgaacagggtgta
gattacttcaccatccatgcaggagttcttctgagatatattccattaacagcaaaacgc
atgacaggaattgtctccaggggaggatctattcatgctaagtggtgcttagcttatcac
aaagagaattttgcttatgagcactgggatgacattcttgacatctgcaatcagtatgat
gtggccctatccattggtgatggtctaagacctggatccatctacgatgcaaatgacacg
gctcaatttgctgaactcttgacccaaggagaactgacccgtagagcatgggaaaaggat
gtgcaggtgatgaatgaaggacctggacatatcccaatgcacaagattcctgaaaacatg
cagaaacagttagaatggtgtaatgaagcacctttttacacccttggtcctttaacaact
gatattgctcctggctatgatcacattacctctgcaatcggtgctgcaaatattggtgca
cttggtacagctcttctctgttatgtgactccaaaagaacaccttgggttgccaaaccgg
gatgatgttaaggctggagtgatagcttataagatagcagctcatgcagctgatttagcc
aaatgtcacccacatgctcaggcctgggatgatgcgttaagcaaggcaagatttgaattt
cgatggatggaccagtttgctttgtcattggatccaatgacagccatggccttccatgat
gaaaccttgccatcagatggtgcgaaagtggcacatttctgttcaatgtgtggccctaaa
ttttgctccatgaagataacagaagatgtgagaaagtatgctgagaaatatggctatgga
actgctgaggaagctttgcagcgtgggatggatgctatgagtgctgaatttcaagctgcc
aagaaaactatcagtggggagcaacatggtgaagctggtggagagatttacttgccagaa
gcttacgtaaactccaaggagaggactgcatga
DBGET
integrated database retrieval system
