Vibrio campbellii ATCC BAA-1116: M892_10900
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Entry
M892_10900 CDS
T02837
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca00730
Thiamine metabolism
vca01100
Metabolic pathways
vca01240
Biosynthesis of cofactors
Module
vca_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
M892_10900
Enzymes [BR:
vca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
M892_10900
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AGU94993
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All DBs
Position
I:2367972..2369912
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AA seq
646 aa
AA seq
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MSSRKQARLEAKQFIDTLSVQPYPNSSKVYVEGSRPDIRVPMREISLADSLIGGTKEAPI
FEPNEPVRVYDTSGVYTDPEHTIDLYNGLPKLREGWIEERSDTELLDEVSSVYTKERLED
ETLDDLRYGNLPRIRRAKDGQCVTQLHYARQGIITPEMEYIALRENMGRAQYRDEVLNQQ
HPGQSFGANLPKDITAEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVAISLGDGLRPGSVADANDEAQFAELRTLGELTKVAW
EYDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDVAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKVGMITYKLAAHAADLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLSLDPDTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAISIKMLDDPLEGMRQKSQEFRDTGSELYHPAAYAEVSD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcaagcaagcgagactggaagcaaaacagttcattgatacactctcggta
caaccgtaccctaattcaagcaaagtctacgtagagggttcacgtcctgatattcgtgtg
ccaatgcgtgaaatatcactcgctgatagccttattggaggcacaaaagaagcgcctatt
ttcgagcctaatgagccagtacgcgtttacgatacctcgggtgtatacacagatccagaa
cacaccattgacctctacaacggcttacctaagctgagagaagggtggattgaagagcgc
tccgatactgagctacttgatgaagtaagctcggtgtacaccaaagagcgcttagaagat
gaaacgctagacgatcttcgttacggaaatctaccacgtattcgacgtgccaaagatggg
caatgcgtgactcaattgcactatgctcgccaaggtataatcaccccagaaatggaatac
atcgctctacgtgaaaatatggggcgtgctcaataccgtgatgaagtgctgaatcaacaa
catccgggtcaaagcttcggagcgaatcttccaaaagacattaccgccgagtttgtgcgt
aaagaagtcgccgaaggtcgagcgattatcccttccaatatcaaccacccagaatccgaa
ccaatgatcattggccgtaactttttggtcaaagtgaacgccaacatcggtaactcatcg
gtcacttcttcgattgaagaagaagtagagaagttagtatgggcaacgcgctggggtgga
gataccgttatggatctctctactggacgtaatattcacgaaactcgcgagtggattcta
cgtaacagtccagttccgatcggtaccgtaccaatgtatcaagcgcttgagaaagtgaat
ggtgtggcggaaaaccttaactgggaagtgatgcgcgatactctgatcgagcaagcagag
cagggcgttgactacttcactatccatgccggtttactacttcgttatgtgccaatgact
gcaaaacgtgttactggtatcgtctctcgtggtggctctatcatcgcgaaatggtgttta
gcgcatcaccaagaaagtttcttatatacccatttccgagagatctgtgaaatctgtgct
aagtatgatgtcgcaatatctcttggtgatggtctgcgtcctggctcggttgctgatgct
aacgatgaagcgcaatttgcagagcttcgtactcttggcgaattgaccaaggttgcgtgg
gaatacgacgtacaggtgattattgaaggccctggccatgttccaatgcatatgatcaaa
gagaacatggaagagcagttagagcactgtcatgaggctcctttttatacccttggtcca
ttgacgacagacgtcgctcctggttacgaccatattacttcaggcatcggcgctgccatg
attggttggtatggctgtgcaatgctttgctacgtaactccgaaagagcaccttggttta
ccaaacaaagaagatgtgaaagtaggcatgatcacttacaagcttgccgcgcacgccgct
gatttagcgaagggacaccctggtgcacaagttcgtgataacgcgctttctaaagctcgc
ttcgagttccgttgggaagaccaatttaacttgtcgctcgacccagatactgctcgtgct
ttccatgatgaaaccttgcctcaagagtctggaaaagttgctcacttctgttcgatgtgc
ggaccaaagttctgctccatgaagatttcgcaagaagtccgagaatatgcgaaagacact
gagcaagttgctgcggaccaagctatctcaatcaaaatgctagatgatcctcttgagggg
atgcgtcagaaatcgcaagaatttagagacacaggttctgagttataccacccagcagca
tatgccgaggtaagtgactga
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