Varibaculum cambriense: CYK25_004035
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Entry
CYK25_004035 CDS
T09090
Name
(GenBank) DEAD/DEAH box helicase
Organism
vcb
Varibaculum cambriense
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WIK89347
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All DBs
Position
complement(874475..877156)
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AA seq
893 aa
AA seq
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MSNNVPEPAWRRLIGAMFTSPHPEITPGADLGICIELDGSFHPLRREVSGTWTRNRASWR
DLCQTKWESVSAGLDRTQLSCLRQVAGLLEKAPQRLSSEEAAQVSPAIRTLAQAGFSFAL
GTEPLTPLHFSPVLARPFLDICAPGDAALRFGIDFSAGKDPAGRTVAATCVAAGLELVAS
AELGCFAFWDDRFGALNRVLGAKPVRIPQADLADFLLQDFPCLSESFPVYSLDDSFEFPK
YRYLLEVGTSQADDLYRIHLRAMRELEGQKIETSVPPDQIAQLKTQVTKWLRRQEGVFTF
DSFLSCPAHRINQILDELETVFDGQDLEVNRHGIPRSFSQQGGEIIVDLSPNTYGWFTPQ
VRLRLGDRDFTSSEIAQIRERGGLIDADTYLSEADLDRLTLLSERAGLNRRGIHPAIIDL
SQILEGTQAQVRGLEAWKSRQLKLPPIAPPHTAKLREYQCTGVSWLLAQLSIGPGAVLAD
EMGLGKTLQILAAIKSLPTSNPVLVVAPTSVINVWESQAQCFYPEIEVRALRSGTEIEDG
FHEADLVVTSYGLLRRHAEAFLEPQWQGVICDEAQLVKNPRTQAWRVLADLRREWTICAT
GTPLENSLADLHAILSLAQPGTLLSREQFAALQLRGIDQVRSLVAPYMLRRTKAEVAPDL
PPKIEQVLRVDLEPGHSSAYRELETQARRQISGLLQSGDRMSILAALTALRRASLDLRLV
GGRAGITSAKTNALVEQLQAIPGHKALVFSQFTSYLKLIKETLEEAGIKTAYLDGSTRQR
DQVVKEFSEGDAQAFLISLRAGGTGLTLTAADYVFVMDPWWNPAVEEQAIDRAHRIGQDR
PVNVYRLVAKGTIEEKVSQLQQRKRDLFTSVVKSSGSMAELASSLLMENNNTN
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacaatgtcccggaaccggcgtggcgacgcctgataggcgcgatgtttacctcc
ccgcaccccgaaattactcctggcgctgacctgggaatttgtatcgaattggatggcagt
ttccatcctttacgccgggaagtttctggcacttggacccgcaatcgtgccagttggcgt
gacctttgccaaactaaatgggaatcagtttctgccggtttagataggacgcagctcagc
tgcctgcgtcaggtggctgggctattggaaaaagctccccagcgattatcttccgaggag
gccgcgcaagtatcccccgcgatccgtaccttggcgcaggcgggattttcttttgccctc
ggcaccgagcccctcactcccctgcatttctctccagttctggcgcgtcctttcctggat
atttgtgctcctggcgacgcagctctacgttttgggattgatttttctgccggtaaagac
ccggccgggcgtacggtcgccgctacttgcgtggcggccggtttagaactggtggccagc
gcagaactagggtgtttcgccttctgggatgatcgcttcggagcgcttaaccgggtgttg
ggggcgaaaccggtgcggataccgcaagcagatttagcggattttttgttgcaagatttt
ccgtgccttagcgaaagtttcccggtctattctttggatgacagttttgagttccccaaa
tatcgctacctgctggaagtgggaacttcccaggcagacgacctttaccgaattcacctg
cgcgccatgcgcgagcttgaggggcaaaagattgaaaccagcgtcccgcctgaccagatt
gcgcagctgaaaacccaggtgacgaagtggttgcgccgtcaagaaggagttttcactttc
gatagcttcctttcttgccccgctcaccgcataaaccagattttggatgagctggaaacc
gtttttgacggccaggatttagaagttaaccgccacggaattccgcgttcattttcgcaa
cagggtggagagatcatcgtggatttatcccccaatacttacggctggtttaccccgcag
gtgcggctgcgtttaggtgaccgtgactttacatcctccgagattgcccaaattcgcgag
cggggcggactaatcgatgccgatacttatcttagtgaagccgatctggatcggctgacg
ctgcttagtgagcgcgccggccttaatcgccgtgggatccacccggcgattattgacctc
tcccagattctggagggtacgcaagcacaggtgcgcggcctggaagcctggaagtcacgc
cagctaaagttgccgccgattgccccgccccacaccgccaagctgcgcgaatatcaatgc
acgggcgtgtcttggttgctggcgcaactgtcgattggtcccggagcggtgctcgctgat
gaaatgggattgggaaaaactctgcagattttagcggcgattaaatccttacccacctca
aatccagtgctggtagtagcgccaacctcggtgatcaatgtttgggaatcccaggcacaa
tgcttttaccctgagatagaggtgcgggccctgcgcagcggcaccgaaatcgaggacggt
ttccacgaggcagatttagtggtcacttcctacgggttgctgcgccgccatgccgaggct
ttcttagagcctcagtggcagggggtaatttgtgacgaggcgcagctggtgaagaatccg
cgtacccaagcctggcgcgtcctcgcggatctacgccgcgagtggacgatttgtgctacc
ggcactcccctagagaattctttagcggatttgcatgcgattttatctttggcgcaacca
ggcacgttgctttcgcgggaacagtttgcggccctgcagctgcgcgggatcgaccaggtg
cgttcgctggtggctccctatatgttgcggcgcactaaagcagaggtagcaccggatttg
cctccgaagattgaacaggtgttgcgggttgatttagagccggggcatagctccgcttat
cgggaactggaaacccaggcacgccgccagattagcgggttgctgcaatccggggatcgg
atgtcgattttggcggcgctgacggcgctgcggagagccagcttagacctgcgtctggta
ggaggacgtgccgggataactagcgcgaaaactaatgctctagtggaacagttacaagcg
atacctggccataaagccctagtgttttcccagttcacttcctatttaaagttgattaaa
gagactttggaggaggcaggaataaaaaccgcttatctggatgggtctactcggcagcgt
gaccaggtagttaaggagttttccgagggagacgcgcaagcttttttgatttccctgcgg
gcaggcgggacggggctgactttgactgccgccgactatgtgtttgtgatggatccgtgg
tggaacccggcagtcgaagaacaggcaatcgatcgcgctcaccgcatcgggcaagaccgt
ccagtcaatgtctaccgcctggtagcgaagggaaccatcgaagaaaaagtatcccagctg
cagcaacgtaagcgcgacctctttacttcagtagttaaatcttccggctctatggcagag
ctagccagttccctgttaatggaaaataacaatacgaactag
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