Vibrio cholerae O1 El Tor FJ147: IR04_04700
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Entry
IR04_04700 CDS
T03827
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00330
Arginine and proline metabolism
vcf00480
Glutathione metabolism
vcf01100
Metabolic pathways
vcf01110
Biosynthesis of secondary metabolites
vcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
IR04_04700
09106 Metabolism of other amino acids
00480 Glutathione metabolism
IR04_04700
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
IR04_04700
Enzymes [BR:
vcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
IR04_04700
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJZ98516
LinkDB
All DBs
Position
II:complement(987322..989484)
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AA seq
720 aa
AA seq
DB search
MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcacaacccaacgt
gaagtggtggatgtactgaaaaccgacttctgtgacattggtgcggcggtggtttccgtc
gaagacgtacaaaacggcatcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgccgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagtggaaactgccgtg
cgtcgttatcaagaaagtttgttgccacctttctttggtacattgaaaaaatacgtggac
atgggtaactccacttttgcttgcccaggccatcaaggtggtcagttcttccgtaagcac
ccggttggtcgccagttttttgatttctttggtgaaaccttgttccgctctgatatgtgt
aacgcggacgtacgtttgggcgacttgctgatccatgaaggtgcaccgcatgatgcacag
gcttacgccgcgaaagtgtacaacgcggataaaacctacttcgtacttaacgggacttca
gcttccaacaaagtggtgtgtaacgccctgctgacaccgggagatctggtgctgtttgat
cgcaacaaccataaatccaaccaccacggtgcgttaattcaagcgggtgcgacaccggtt
tacttagaaacggcgcgtaacccattcggttttatcggtgggattgatacgcactgcttt
aacgaatcttacctacgtgatgcggtacgtaatgtcgacccaagccgcgcggaagcgaaa
cgcccattccgtcttgccatcattcagcttggcacttacgacggtacgatttacaacgcg
cgtcaggtggtggatcgcatcggtcatttgtgtgactacatcctgtttgactcagcatgg
gtgggctatgaacagttcattcccatgatgaaagactgctcgccacttcttctcgatcta
aagcctgaagatccgggcatcatcgtcactcagtccgtgcataaacagcaggcaggtttc
tcgcaaacttcgcaaattcacaagaaagatcaccacatcaaaggccaagagcgttactgc
aaccataaacgctttaacaatgcctttatgctgcacgcttcaaccagcccattctacccg
ctgtttgcggcgctcgatgtgaacgccaagatgcacgaaggggacagtggccgctaccta
tggcgtgaagcggtaaaaaccggtatcgaagcccgtaagcttctaatgaaaaaatgcaaa
tacatcaagccgttcattccaccaatgatcgaaggtaaaccttggcagtctcaccccacc
gagcaaattgccgatgatttacgtttctttgaatttgagccgggccagaaatggcatgcg
tttgaaggttacgagcatggtcagtatttcgttgacccttgtaagttcctgctgaccaca
ccggggattgacccagaaactggcgaatacgagcactttggtattccggccaccatactg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactctatcctc
ttcctgctcaccccagccgaagatatggcgaagatgcagcatttagtggcacaaattgct
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtattgccgaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttgtgtcaggaaatgcac
gatctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttat
ttcccacgtgcggtaatgaacccacaagaagcgaacttggcctttgtacgtggtcaggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgccgctgaaggcgcactgccttac
cctccgggtgtgttgtgtgtggttccgggagaaatatggggcggttcagtacagcgttac
ttcctcgctctagaagaaggcattaacttgctgccgggttttgcgcctgaattgcaaggg
gtgtatttggagccgacaggcgagggacgagtgcaagccatgggctatgtactgaaacgt
taa
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