Vibrio cholerae O1 El Tor N16961: VC_2319
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Entry
VC_2319 CDS
T00034
Name
(GenBank) exodeoxyribonuclease V, 67 kDa subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VC_2319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_2319
Enzymes [BR:
vch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VC_2319
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC_2319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_16
DEAD
AAA_28
UvrD_C
TrwB_AAD_bind
T2SSE
NTPase_1
MukB
AAA
ResIII
AAA_7
CbiA
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAF95463
UniProt:
Q9KPP7
LinkDB
All DBs
Position
I:complement(2466516..2468636)
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AA seq
706 aa
AA seq
DB search
MMFWDSEVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRG
HICLPLCDAQGNRCDLAALIGLYGEASLQHSERWLAVDWQALLQASPLVGQQGEAVPLMF
DGSRLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQK
PLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVA
AAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTES
MGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVD
LPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQLAELTGF
ATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFSDIE
HFALSGEHYQQLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCRLLCA
LREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRD
RDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYSPI
LTRELVYTGITRAKKQLKLYCDNKVLQRAIKVKTQRASGLVARLEQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttgggatagcgaagtagcgaaacgtctgctggcacaaggcgcgctgcgtcct
ttggatgtgcagtttgcccgctttattggcaagcaagccgtattggcagggcacaacgct
gcagaaagtgagcttttgagtgtactgagcgcggcgctcagtgcagaacttgggcgtgga
cacatctgtctgccactgtgtgatgcacagggtaatcgttgcgatctagcggcgctgatt
ggtctttatggtgaagcgagtttgcagcacagtgaacgctggttagcggtagactggcaa
gccttactgcaagcctcgccgttggtggggcagcaaggtgaagcggtgccgttaatgttt
gatggctcaaggctctatctgcatcgctactggcattatgaaaagcaactggcggcgcga
ttgactgagttggccgcaccccaacgtttaagccctgctgaactggctaacttgcgtgaa
cgcctgaataccttatttgcccgcgactatttaggcttgtggcaagcactacaacaaaag
ccgctaagttcggtcgagcggattcaactgctgaatgatcgattggatgttgtggagtcg
gatgcgctggattggccagcgattgaagctgtagtcgaaaaagcgcagcgtgccgcggat
ttgcaagctttagagcagcttattccgcttactcactgcttaaactggcaaaaagtggcg
gccgctgtcgctcttacccgccgttttgcggtgatttccggtgggccgggaaccggcaaa
accaccacagtgaccaagcttctggcggcgctgattagccaaagcatggcgcaaggtaaa
gtgccagagatcaaattgatcgctccaaccggtaaagccgcggcacggttaaccgaatcg
atgggtaaagcggtgagtcagctggcgatagagcctgagatcgccgcggcgatcccgagc
tcttccagcaccattcaccgtttgcttggcgcgattccgggcagcgctgagtttcgtcat
catacacgtaatccactccatcttgatctgttggtggtggatgaagcgtccatggttgac
ttgcctttgatggtgaaactggtcgaagcgctacccaagcacgctcggttgattttgctc
ggcgataaagatcaattggcttcggtggaagcgggggcggtgctcggtgatatttgtacc
ttcctgaaccaaggttacggccatgagcagggcgcgcagttggctgaactgacggggttt
gccactctgcgccaaactgccagtaaaacggtaaacccggtggcggattgcttatgtatg
ctgcaaaaaagctaccgttttgatgcgcgatctggcattggtcaattggcgaaagcgatc
aacagtggatctccggcgcgcgttgaagcggtgtggcaacagtcgttcagcgatattgaa
cactttgcccttagtggtgagcattatcagcaactgctgcaaaccttagtgcaggcttat
cgtccttatctgagcttgcttaatcagccaactgagcaatttgagtcgacccaacaaagc
atgctcacacttgccaaatcagcacttgatgcgttcagtcgctgccgattgctctgtgcg
ctgcgtgaaggcgattttggagtgatggggctgaacactcgcatcgaacgggcgttgaat
gctcacaagctgattaaaacgcaagaagagatctggtatcacgggcggccgatcatggtc
acgcgtaacgatcatggtttggggttatacaatggcgatattggcttgtgtatgcgcgat
cgtgacgatgatcagggcagactgaaagtctattttgagttgccggatggcagcattaaa
gccgtgttgccgagccgagtcccgcaacatgaaaccgcgtatgcgatgaccatacataaa
tcgcaaggcagcgaatttgatttaactttgctgattttaccgccggattacagtccgatt
ctgacgcgtgagttagtttacacggggatcacaagggcgaaaaaacagctcaaattgtat
tgcgataacaaggtattgcagcgagcaattaaagtgaaaacccaacgggcgagtggctta
gtggcaaggttggagcagtaa
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