Vibrio cholerae O1 El Tor N16961: VC_A0578
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Entry
VC_A0578 CDS
T00034
Name
(GenBank) conserved hypothetical protein
KO
K11925
SgrR family transcriptional regulator
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vch03000
]
VC_A0578
Transcription factors [BR:
vch03000
]
Prokaryotic type
Helix-turn-helix
Other families
VC_A0578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AAF96480
UniProt:
Q9KM11
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All DBs
Position
II:complement(517364..519061)
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AA seq
565 aa
AA seq
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MSSPRLRVQFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAG
RGKLSQLIFKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGL
QVVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSDTHW
RFYLRPGVRFHNGNLLTTELIVQNLWQLRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLP
LLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRVE
VWVIDEVHSSMVFPSLSNPMKTARGSSTEEVELDPGCTYLLLNRRNGVAKDEHWARYLTD
KLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLPPESKELTIAYHAQHPMF
PTVANAIKQLLSQDGITVNVIKYEHTVVETENVDIWIKPMGIANHRDDALAGWLLNYSDI
EFLSKGEDFNQWVSLIDAWRADSSALFPAKELGKSLVEKHQLIPMFHCWLGISKDQCGAL
QNAKCNALGWFDFSQVWVKPDLSEH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccgcgtttacgtgtacagttcgaaacactctttgagcattttcaaggtcaa
gacgttgaaacccaactggaagatgtcaccgatattcttttttgcactcgacgtaatgcg
cgtattgttctcaataaaatggaagaagaggggtggattgagtggcatcctgcggcgggg
cgcggcaaactctcgcaactgatctttaaacgcagtcgcgcggatgtcagtgagaacctt
gcgcgccgttatctcaatgaaggaaagataggccaagcgtttgccgtgcttgatcaggac
gccgcaaaattaactcaagtgatagaaagctaccttggcgttcagcatcaagaaggtctg
caagttgtcaggttgccttactatcgtcagctatcgatgttgaacccacaaaagccgatg
cgccgctctgaacagcatattgcgcgacaggtgtttagcggccttacgcgtcttgatgaa
gaagagcaattacagcctgatttagcacacgcttggcaggcgctatcagatactcactgg
cggttttacttacgccccggagtgcgctttcataatggcaatctcctcaccaccgaactg
attgtgcaaaatctttggcagctacggttgcttaatctttttgcccatattgaccgagtt
gactcaccttacccttgggcggtcgatgtgcatctgcaaaagcccgatacccgcttaccg
ctattgcttgccgaagcctgtgccaaaatcctcccagcggagtccgatcgcaatcccgat
tttgatttaatgccagtaggaacggggccctacaaagtggttctaaacgatgaaaaacgt
ttggttttgcaagcgtttgatggctattttggttttcgtccactgctggaccgagttgaa
gtttgggtgattgatgaagtgcactcttccatggtttttccaagcttatccaatccgatg
aaaactgctcgaggatcatcaacggaagaggtagagctggatcccggctgcacctattta
ctgcttaatcgtcgcaatggcgttgccaaagatgaacattgggcgcgctatctcactgac
aaacttaatgcgctcaacctgtttcgtcttctgccggaagagaaaatcattgaacttggg
gtgttgccagcctatgggttaaaacccgggtggtatcaccactcagcggcagcgcaaaga
acgttaccgccagaatccaaagaacttacgattgcctatcacgctcagcatcctatgttt
ccgactgttgctaatgcgattaaacaattgctcagccaagatgggatcacagtcaatgtc
atcaaatatgaacacacggtcgttgaaactgaaaatgtggatatttggattaagccaatg
ggtattgctaatcaccgtgatgatgcgttagcggggtggttactcaattactccgatatt
gagtttttgagcaaaggagaggatttcaatcagtgggtgagtttgattgatgcttggcgt
gctgactcttctgcgctcttccctgcgaaagaactggggaaatcactggtggaaaaacac
caactgatcccgatgttccactgctggttaggcatcagtaaagatcagtgcggtgcgtta
caaaatgcgaaatgcaatgcgctaggttggttcgattttagccaagtctgggtaaagcca
gacttgtcagaacactag
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