Vibrio cholerae O1 IEC224: O3Y_04850
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Entry
O3Y_04850 CDS
T01766
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
vci
Vibrio cholerae O1 IEC224
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vci03021
]
O3Y_04850
Transcription machinery [BR:
vci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O3Y_04850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
Motif
Other DBs
NCBI-ProteinID:
AFC57850
LinkDB
All DBs
Position
I:complement(1110824..1111387)
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AA seq
187 aa
AA seq
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MSILNLFGKKVSQRPVNNDMDRQRKYEALVRAYHRDLYRYAYWLCKDRSIAEDLVQETCL
RAWKSLDSLLDEKAAKAWLITILRRENARRFERKQFDLVDIDDHDYEAKYSDDEHHQNEW
LQRQILKLDVEYRELLFLQVVGGFSGEEIADILSLNKNTVMTRLFRARNQLKEMMDGSEH
YPEQQNG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatattgaatctgtttggaaagaaagtttcccaacgtccggtcaataatgacatg
gacagacaaagaaaatacgaagcactggtgcgagcttatcatcgcgacctttaccgatac
gcctattggttgtgtaaagatcgctcgattgccgaagacttagtgcaagaaacctgcttg
agagcgtggaaatcgctcgatagcctgctggatgaaaaagcagccaaagcttggctaatt
acgattttgcgcagagaaaatgctcgccgctttgaacgtaaacagtttgacttagtcgat
atcgacgatcacgactacgaagccaaatatagcgatgatgagcaccatcaaaatgagtgg
ctgcaaaggcaaattttgaagttagatgtcgaatatcgcgagctcctctttttacaagta
gtgggcggattcagtggtgaggagatcgcagacatcctttcactgaataaaaatacggtg
atgacccgtttgtttagagcacgtaaccaacttaaagagatgatggatggttcagaacac
tacccggagcagcaaaatggatga
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