Vibrio cholerae O1 MJ-1236: VCD_000741
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Entry
VCD_000741 CDS
T00903
Name
(GenBank) SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA
KO
K11925
SgrR family transcriptional regulator
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcj03000
]
VCD_000741
Transcription factors [BR:
vcj03000
]
Prokaryotic type
Helix-turn-helix
Other families
VCD_000741
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GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACQ62701
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Position
2:841044..842741
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AA seq
565 aa
AA seq
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MSSPRLRVQFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAG
RGKLSQLIFKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGL
QVVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSDTHW
RFYLRPGVRFHNGNLLTTELIVQNLWQLRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLP
LLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRVE
VWVIDEVHSSMVFPSLSNPMKTARGSSTEEVELDPGCTYLLLNRRNGVAKDEHWARYLTD
KLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLPPESKELTIAYHAQHPMF
PTVANAIKQLLSQDGITVNVIKYEHTVVETENVDIWIKPMGIANHRDDALAGWLLNYSDI
EFLSKGEDFNQWVSLIDAWRADSSALFPAKELGKSLVEKHQLIPMFHCWLGISKDQCGAL
QNAKCNALGWFDFSQVWVKPDLSEH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccgcgtttacgtgtacagttcgaaacactctttgagcattttcaaggtcaa
gacgttgaaacccaactggaagatgtcaccgatattcttttttgcactcgacgtaatgcg
cgtattgttctcaataaaatggaagaagaggggtggattgagtggcatcctgcggcgggg
cgcggcaaactctcgcaactgatctttaaacgcagtcgcgcggatgtcagtgagaacctt
gcgcgccgttatctcaatgaaggaaagataggccaagcgtttgccgtgcttgatcaggac
gccgcaaaattaactcaagtgatagaaagctaccttggcgttcagcatcaagaaggtctg
caagttgtcaggttgccttactatcgtcagctatcgatgttgaacccacaaaagccgatg
cgccgctctgaacagcatattgcgcgacaggtgtttagcggccttacgcgtcttgatgaa
gaagagcaattacagcctgatttagcacacgcttggcaggcgctatcagatactcactgg
cggttttacttacgccccggagtgcgctttcataatggcaatctcctcaccaccgaactg
attgtgcaaaatctttggcagctacggttgcttaatctttttgcccatattgaccgagtt
gactcaccttacccttgggcggtcgatgtgcatctgcaaaagcccgatacccgcttaccg
ctattgcttgccgaagcctgtgccaaaatcctcccagcggagtccgatcgcaatcccgat
tttgatttaatgccagtaggaacggggccctacaaagtggttctaaacgatgaaaaacgt
ttggttttgcaagcgtttgatggctattttggttttcgtccactgctggaccgagttgaa
gtttgggtgattgatgaagtgcactcttccatggtttttccaagcttatccaatccgatg
aaaactgctcgaggatcatcaacggaagaggtagagctggatcccggctgcacctattta
ctgcttaatcgtcgcaatggcgttgccaaagatgaacattgggcgcgctatctcactgac
aaacttaatgcgctcaacctgtttcgtcttctgccggaagagaaaatcattgaacttggg
gtgttgccagcctatgggttaaaacccgggtggtatcaccactcagcggcagcgcaaaga
acgttaccgccagaatccaaagaacttacgattgcctatcacgctcagcatcctatgttt
ccgactgttgctaatgcgattaaacaattgctcagccaagatgggatcacagtcaatgtc
atcaaatatgaacacacggtcgttgaaactgaaaatgtggatatttggattaagccaatg
ggtattgctaatcaccgtgatgatgcgttagcggggtggttactcaattactccgatatt
gagtttttgagcaaaggagaggatttcaatcagtgggtgagtttgattgatgcttggcgt
gctgactcttctgcgctcttccctgcgaaagaactggggaaatcactggtggaaaaacac
caactgatcccgatgttccactgctggttaggcatcagtaaagatcagtgcggtgcgtta
caaaatgcgaaatgcaatgcgctaggttggttcgattttagccaagtctgggtaaagcca
gacttgtcagaacactag
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