Vibrio cholerae O1 MJ-1236: VCD_001109
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Entry
VCD_001109 CDS
T00903
Name
(GenBank) ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCD_001109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcj03032
]
VCD_001109
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
VCD_001109
DNA replication proteins [BR:
vcj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
VCD_001109
Prokaryotic type
Elongation factors (bacterial)
RNase H
VCD_001109
Elongation factors (archaeal)
VCD_001109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
ACQ59288
LinkDB
All DBs
Position
1:complement(89215..89655)
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AA seq
146 aa
AA seq
DB search
MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL
EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV
FKVKAHSGIEGNERADLLAVEAAEAD
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgagttattcaatttacgtagacggcgctgcaccaaacaaccaatacggatgtacacga
ggtggtatcgggctggtggtcatggatgaagacaacgagattgttcatgaagagagcatc
accatcaatcgaaaaaccgacaatgctgagctggaactactggccttaattgaagcattg
gaatacgcagaagatggggatgttatctattcggacagcgattactgtgtgaaaggtttc
aacatctggatggacgattggaaagaccgaggttggcgtcgagcggataagaaacctgtt
aaaaaccgccagctttggcaacaagtggacgagttgagttctaggaagtatgtcgaggta
tttaaggtcaaagcacattcgggcattgaagggaatgaaagagctgacctgttagcggtt
gaagcggcggaagctgactaa
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