Vibrio cholerae O1 LMA3984-4: VCLMA_A0541
Help
Entry
VCLMA_A0541 CDS
T01871
Name
(GenBank) (GlcNAc)2 ABC transporter, periplasmic substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCLMA_A0541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcl02000
]
VCLMA_A0541
Transporters [BR:
vcl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VCLMA_A0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEA77831
LinkDB
All DBs
Position
I:complement(610485..612035)
Genome browser
AA seq
516 aa
AA seq
DB search
MVRNFNPYLATNLRTTTDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGV
KWSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYE
ISLIPIVAEHVWKDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVD
CLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFK
NPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHK
KYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAV
EQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGM
PRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNT
TRFTGWWSEENPKGRPSVWAGIPERLLHVLDLKPVK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggtacgtaacttcaacccgtacttagcgactaacctgcgtacaaccaccgactttatc
tatgaacctctggttgtattcaatgaaatgaaaggtaatacgcctgttttccgtctggca
gaaagctacaaaatggctgacgacctgatgagcgtgactttcgatatccgcaaaggcgtt
aagtggtctgacggtgaagcattcacagctgacgacgtggtttactctttcggcctgctg
aaagcaaaaccagaacttgatcaacgtggtatcaacaagtgggttaccagcgttgagaaa
gttgacgaatacaaagtgcgtttccgtttgtctgaagcaaactcaaacgtaccttatgaa
atttctctgatccctatcgttgctgagcacgtgtggaaagacgtgaaagatccaaccacc
ttcactaacgaaaatccagtaggtactggtcctttcaccgtgatcgacactttcactcca
caactgtacatccagtgtcgtaacccgaactactgggatgccgctaacctagaagttgac
tgtctgcgtgttccacaaatcgcaaacaacgaccaactactgggcaaaatcgttaactct
gagctcgactggacttcttcattcgttccagatatcgaccgcacttacgccgcagcgaac
cctaaccaccactactggtatccagcagcgggtactcaggcgttcatggtgaacttcaaa
aacccagatccagcgaaaaaagaagcactggataacgtagatttccgtcgtgcgttctct
atggctctggatcgtcaaaccatcattgatatcgccttctacggcagcggtactgtgaac
gacttcgcatctggccttggctacgcattcgaagcatggtctgatgaagcgacccacaaa
aagtacaaaggcttcaacacttatgacgttgaaggctctaagaagctactggcaaaagcg
ggcttcaaagatgtgaacggtgacggtttcgttgaaactccatcaggcaaatcttttgaa
ctgctgatccaatctccaaacggctggactgactttaacaacacagttcaactggcggtt
gagcagctacaagaagtgggtatcaaagcgaaagcacgtactcctgaattcgcggtttat
aaccaagcgatgctagaaggtacttacgacgttgcgtacaccaactacttccacggcgct
gacccattcacttactggaacagcggctacaactcagctctacaatctggcgacggtatg
ccacgctttgcgatgcactacttcaccgataagaagcttgatggtttgctagacagcttc
tacaaaacagcggacaagaacgagcagttagcgatcgctcacggtattcagaagatcatt
gctgaaaaccaagtgactatccctgtaatgtctggtgcatggatgtatcagtacaacacc
actcgtttcactggctggtggagcgaagaaaatccgaagggccgtccaagcgtttgggct
ggtatcccagagcgtctactacacgtactggatctgaaaccagttaagtaa
DBGET
integrated database retrieval system
