Vibrio cholerae O1 LMA3984-4: VCLMA_A1603
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Entry
VCLMA_A1603 CDS
T01871
Name
(GenBank) Outer membrane protein OmpT
KO
K10940
outer membrane protein OmpT
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCLMA_A1603
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcl02000
]
VCLMA_A1603
Transporters [BR:
vcl02000
]
Other transporters
Pores ion channels [TC:
1
]
VCLMA_A1603
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AEA78813
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All DBs
Position
I:complement(1828806..1829840)
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AA seq
344 aa
AA seq
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MKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAGVD
ANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKTNFGKFSFGKQWTTSDDVYGADYSY
FFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGYGFPEDNAKQELAELYVGATFGDLA
VHAGGGQNRDKAFKVGSNTVGTTTTDIKADVTNSYFEVTGEYTIGDALIGVTYYNAELDV
ENNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQEANTGADEDGTLVYLGVEYKFASWA
RVYAEYGYGDGTTLGYTNKGSDAEVKATKVDSANNFGIGARIYW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctctgtaaacgcagct
gaaattctaaaatcagatgctggcacagttgatttttacggtcagctacgtacagaattg
aaattcttagaagataaagatccaacaattggttctggttcttcgcgcgctggtgttgat
gcaaactacaccgttaacgatagcttagcgttacaaggtaaagtggaattcgcactaaaa
gacagtggcgatatgtatgttcgtaaccacattcttggtgtaaaaactaattttggtaag
tttagctttggtaaacaatggactacatctgacgatgtatacggtgctgactactcttat
ttctttggtggtacaggtcttcgttacggcacactgtctgatgcactacacgattctcaa
gtcaagtatgtttacgaagctgacagcttctgggttaaagctggttacggttttccagaa
gataatgcaaagcaagagctagcagaactgtatgtaggtgcaacatttggtgatttggct
gtgcacgctggtggtggtcaaaaccgtgataaagcattcaaagttggtagtaatacggtt
ggcacaacaaccacagatattaaagctgacgtaacaaatagttactttgaagtgacaggt
gagtacactattggtgatgcactgattggtgttacttactacaacgcagaactagatgta
gaaaataacccactagtgatcgatgaagacgctatttctgttgctggtacatacaaagtt
gctgacaagacaaaattgtatgctggctatgagtatgtgatgcaagaagcgaacactggc
gcagatgaagatggtactcttgtttacctaggtgttgaatacaaatttgcaagctgggct
cgtgtatatgctgagtatggctacggcgatggtacaactctgggttacaccaacaagggt
tctgacgcagaagttaaagcaacgaaagtcgacagcgctaataactttggtatcggtgct
cgtatctactggtaa
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