Vibrio cholerae O1 M66-2: VCM66_0225
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Entry
VCM66_0225 CDS
T00891
Name
(GenBank) conserved hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00540
Lipopolysaccharide biosynthesis
vcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VCM66_0225
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcm01005
]
VCM66_0225
Enzymes [BR:
vcm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
VCM66_0225
Lipopolysaccharide biosynthesis proteins [BR:
vcm01005
]
Core region
VCM66_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
QCR10
Motif
Other DBs
NCBI-ProteinID:
ACP04557
UniProt:
C3LQJ9
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All DBs
Position
I:complement(227427..228626)
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AA seq
399 aa
AA seq
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MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAY
FLSNLPITIIDGDTLRYLDAGIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGAL
AFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSFTQTRFKYYLYLSVVAATVAT
ILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDE
WTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAF
GFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaataactaaaacctcaattttccttactatctcactacttttaattaca
ccgggattttctgttgtagcggtaggattactgactctctactctagtgttaaattaatt
aaaaatggcttaaaccttaataaattcgacattattcctcttataaccctgagtgcgtat
tttttgtcaaacttaccaattaccattattgatggtgatactttaagatatttagatgca
ggcattcgtgctctgttatgtatacctatgtactttttcattaagaatgaaatttccaaa
ggcgcaaatttagataacacactatgcacatcaaccatattggcttcttttggtgcttta
gcgtttgctttttatcaatttttcatattaaacatgccacgcgttgatggttttctattt
agtatcaacttcggttatctcgcagcagctttagctatcttatcttttggcttgtcattt
acacaaacaagattcaaatattatttgtatctctcagttgtagctgcaacagtggcgaca
atcttaaccttaacaagaggagccattttaacgctactctttgttttcatcttgttcttt
atcgtcaatgtaagaaaaataaaatttaagcaaacccttgtttttactctaatcagtttt
ttattagtctcagtcagttatcaattttcaccgcgtatacaagaacgggttgattttaca
atttttgaaatatccagcattgccagtaacaatattcacgctgcagcttcatcagggggg
cgacttcaactctggtatgccgctgttgaagcatttaaacacaatccaatttggggtact
acgtattcggaaagagaaagcttaaatattgaactttttaaagaaggaaaagtggatgaa
tggacgagcacggtgcccagaggtcatgcacatagccagtattttgaagctatagctagt
aatggaacattgggaattctggcgattttcgcgatgcttatcttaccatttggggtattt
ttaaacgactatcgaaaaacaggctctccaatcagccaaactggatacctttttgccttt
gggtttatcattttctgtttaactgaagcaccactacaagccaaccttattggaactttt
tatggctttatggtggcaattttttatgcttacatcgcagccaaaagagcaaaaaattga
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