KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_56112
Entry
VOLCADRAFT_56112  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VOLCADRAFT_56112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_56112
Enzymes [BR:vcn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     VOLCADRAFT_56112
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     VOLCADRAFT_56112
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 9618228
NCBI-ProteinID: XP_002946858
JGI: 56112
UniProt: D8TKL6
LinkDB
Position
Unknown
AA seq 355 aa
MRKPPPAEGVPLLNILSWNVAGLRALVKKHPGLIPSLVWREGARVLCLQEHKLQGSHTGE
MEAALGLQAGHDRGRAGWVCSTGKLGYSGVSVHTASRPLSVTVGLGAGGGSTSSPDSDPD
PDSEHEVEGRVVTVELEEAFVVNVYVPNSGEGLKRLDYRINRWDGAFAKYVKGLESRGKP
VIVTGDLNCAHKEIDIHAPKTNLRSAGFTVEERESFGRLLLGEVGLVDTFRELFPCTVAY
TYFTRRFNCREQNKGWRLDYFLTSRALMPPAAAAATATVTVVTTAAATETAVAAVTAVAI
DQEAEAGTALAKANSALAAVAAPTLSTPWRVYDSWILQDVYGSDHLPLGLTLIKV
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcgcaagccgccacccgcggagggggtaccgctgctcaacatacttagctggaatgtg
gcaggactgcgagcgctggtgaagaagcaccccggcctcatcccctccttggtgtggagg
gagggagcccgagtgctgtgcctccaagagcacaagctgcagggcagccacacgggggag
atggaggcggctctggggctccaggcagggcacgacagggggcgtgcgggttgggtctgc
tccacaggcaagttgggttactcgggggtgtccgtacatacagcctcgcggcccctgtcc
gtgacggtgggtctgggggccggggggggatccacctcctccccggattcggatccggat
ccggattccgagcacgaggtggaggggcgggtggtgacggtggagctggaggaggccttc
gtggtgaacgtctacgtgcccaacagcggagagggcctcaagcggctcgactaccggata
aaccgttgggatggcgctttcgcaaagtacgtcaagggcctggagtcgcggggcaagccg
gtcatcgtgacgggggatctcaactgcgcgcacaaggaaattgacatccatgcccccaag
accaacctacgttccgcgggcttcacagtggaggagcgtgagagcttcggccggctgctg
ctgggcgaggtcggtctggtggacaccttccgcgagttgttcccctgcacggtggcgtac
acgtacttcacccgcaggttcaactgcagggagcagaacaagggctggcggttggactac
ttcctcacttcgcgagccctgatgcccccggcagcagcagcagcaacagcaacagtaacg
gtcgtgacaacagccgcagcaacggagacggcagtagcagcagtaaccgcagtagcaatt
gatcaggaggctgaagcgggaacagcgctagctaaagcgaactctgcacttgcggcggtg
gcggcgccgacgctttcgacgccatggcgtgtgtacgacagttggatattgcaggacgtc
tacggatcggaccatctgcccctgggactaacactcatcaaggtttga

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