Volvox carteri f. nagariensis: VOLCADRAFT_56112
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Entry
VOLCADRAFT_56112 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VOLCADRAFT_56112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_56112
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VOLCADRAFT_56112
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VOLCADRAFT_56112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
9618228
NCBI-ProteinID:
XP_002946858
JGI:
56112
UniProt:
D8TKL6
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MRKPPPAEGVPLLNILSWNVAGLRALVKKHPGLIPSLVWREGARVLCLQEHKLQGSHTGE
MEAALGLQAGHDRGRAGWVCSTGKLGYSGVSVHTASRPLSVTVGLGAGGGSTSSPDSDPD
PDSEHEVEGRVVTVELEEAFVVNVYVPNSGEGLKRLDYRINRWDGAFAKYVKGLESRGKP
VIVTGDLNCAHKEIDIHAPKTNLRSAGFTVEERESFGRLLLGEVGLVDTFRELFPCTVAY
TYFTRRFNCREQNKGWRLDYFLTSRALMPPAAAAATATVTVVTTAAATETAVAAVTAVAI
DQEAEAGTALAKANSALAAVAAPTLSTPWRVYDSWILQDVYGSDHLPLGLTLIKV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagccgccacccgcggagggggtaccgctgctcaacatacttagctggaatgtg
gcaggactgcgagcgctggtgaagaagcaccccggcctcatcccctccttggtgtggagg
gagggagcccgagtgctgtgcctccaagagcacaagctgcagggcagccacacgggggag
atggaggcggctctggggctccaggcagggcacgacagggggcgtgcgggttgggtctgc
tccacaggcaagttgggttactcgggggtgtccgtacatacagcctcgcggcccctgtcc
gtgacggtgggtctgggggccggggggggatccacctcctccccggattcggatccggat
ccggattccgagcacgaggtggaggggcgggtggtgacggtggagctggaggaggccttc
gtggtgaacgtctacgtgcccaacagcggagagggcctcaagcggctcgactaccggata
aaccgttgggatggcgctttcgcaaagtacgtcaagggcctggagtcgcggggcaagccg
gtcatcgtgacgggggatctcaactgcgcgcacaaggaaattgacatccatgcccccaag
accaacctacgttccgcgggcttcacagtggaggagcgtgagagcttcggccggctgctg
ctgggcgaggtcggtctggtggacaccttccgcgagttgttcccctgcacggtggcgtac
acgtacttcacccgcaggttcaactgcagggagcagaacaagggctggcggttggactac
ttcctcacttcgcgagccctgatgcccccggcagcagcagcagcaacagcaacagtaacg
gtcgtgacaacagccgcagcaacggagacggcagtagcagcagtaaccgcagtagcaatt
gatcaggaggctgaagcgggaacagcgctagctaaagcgaactctgcacttgcggcggtg
gcggcgccgacgctttcgacgccatggcgtgtgtacgacagttggatattgcaggacgtc
tacggatcggaccatctgcccctgggactaacactcatcaaggtttga
DBGET
integrated database retrieval system