Vagococcus carniphilus: H9L18_13320
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Entry
H9L18_13320 CDS
T06797
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K27000
RNA polymerase sigma-H factor
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcp03021
]
H9L18_13320
Transcription machinery [BR:
vcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L18_13320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ECF
Sigma70_r2
TrmB
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QNN72818
LinkDB
All DBs
Position
complement(2737947..2738528)
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AA seq
193 aa
AA seq
DB search
MLNENELLLTQAKIGSSDAFEELFQKYVPIVLRQRSAYYLRDYDLDDWLQEGRIVCFQSL
QRYNIKQDVTFGLFFKINFKRRIVTLLRHQEAQKRQIYHYTESLESKVDQLGEIFSKGVV
DYRAGTSIDYIFIRESLEDFSEQLSKFEIKVYIYLLLGEGVESIANILNVSVVKVTSGYS
RLRKKIKKQLMEE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgaaaatgaactgttattgacgcaagctaaaatcggaagtagtgatgctttc
gaagagctattccaaaagtatgttccaatagttttaaggcaaagaagtgcttattactta
agagattatgatttagatgactggttacaagaaggtagaatcgtgtgttttcagtcattg
caacgttataacattaaacaagatgtaacgtttggcttgttttttaaaattaatttcaag
cgtcgtattgtaacccttttaaggcatcaagaagcccaaaaacgacaaatttatcattac
acagaatctttagaatccaaagtagatcaactaggagaaatttttagtaaaggtgttgta
gattaccgtgcaggaacaagtatagactatatttttatccgagaatcattagaagatttt
tcagaacaattatcaaaatttgagattaaagtttacatttacttgctgttaggcgaagga
gtagagagtatcgctaatatattgaatgtctctgttgtaaaagtaacgagtggttatagt
cgtctaagaaagaaaataaaaaaacaactgatggaagaataa
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