Vibrio cholerae O1 2012EL-2176: EN18_12565
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Entry
EN18_12565 CDS
T03389
Name
(GenBank) hemolysin
KO
K20951
extracellular matrix protein
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
EN18_12565
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Gene cluster
GFIT
Motif
Pfam:
Beta-prism_lec
FG-GAP_3
PQQ
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
AIT29872
UniProt:
A0A0H6JJ05
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All DBs
Position
1:1504420..1506495
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AA seq
691 aa
AA seq
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MKQTKTLTAISVLALSHLMTQSTAFASSSSDIQTKLKWSWSTSVFHPESNQVMAAPIVVQ
LNDDNGDGKIDEKDVADIIVVTFEGNKYANGGYIRALSGVDGSELWSYSNGGVIADARYA
PAAADLDGDGLIEIVSTSALTPYINILDHQGNIKKQLLKSASGWRSVGDIALADINGDGN
IEILAADGVYSYESGLLFSHDWAPSSIAFDSNGDGQREVFANGTLYQNNGAYLWQYQAND
TVWFSSVANLDGDDKPELVVSVPASLSTPENSEIAVLEHDGSVKWRVNNLSNPGGSVQAV
SSFLGKPSSSATTVDAQSAVYGYTDWAHQQRVLAENHQLAIRSGAVVDAIGANSQNMIGG
SGGSLSTIDTSKVRAIDVTYGKNKYTWKYGVLEMSFTLDNGAKVTVGSKDSAFTYLGLEW
KTKTVPYLGVEWRTKTVSYWFFGWHTKQVAYLAPVWKEKTIPYAVPVTLSKSTTVRYDIP
QGSQLLGMNVWSKEKHLFKHKQQVNAVQFLVGKVTADQSHMGIVYAGYYAVDMYDAQGNK
VWSVANDDLNSGKIGVSAYDFTGDGIDEVLVQDRLRMRILDGQTGRVMGIIANSSGTLWE
YPVVADLEGNNNASLIMVANDYDRESQVNHGVFVYESANPSKPWRNATRIWNQYAFNFSD
INANGTIPTNAQPSWLTHNSFRSATIRVPLK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagacaaaaacgttgaccgcgataagcgttctcgcgttgagccatttaatgact
caaagcaccgcattcgcgtcaagcagcagtgatatacagaccaaattgaaatggtcttgg
tctaccagcgtttttcatcctgagtccaatcaggtgatggccgcgccaattgtcgtacaa
ctcaacgacgataatggcgatggcaaaattgatgagaaagatgtggctgacattattgtg
gtcacctttgaaggtaataagtacgcgaatggtggttatatccgcgccctgagcggtgtg
gatggctctgaattgtggagttatagcaatggaggcgtgattgccgatgctcgctatgca
ccagcagccgcggatctcgatggtgacggactgattgaaatcgtctccaccagcgcgttg
acaccttatatcaatattctggaccaccaaggcaacatcaaaaagcaactgctgaaatct
gcttcaggctggcgttctgtaggtgatattgcactggcagacattaatggcgatggcaac
attgaaattctggctgccgatggtgtttatagttacgaatcaggcttgctctttagtcat
gattgggcaccaagttcgattgcgtttgatagcaatggcgatggccaacgtgaagtcttt
gccaacggtacactctatcaaaacaacggcgcttacctatggcaataccaagccaatgac
accgtttggttctcttccgtagcaaaccttgatggcgatgataagcctgaactggtcgtg
tcggttccagcgtctttgagcacacccgagaacagtgaaatcgctgtgcttgagcatgat
ggctcagtgaaatggcgagtcaacaacctatctaacccaggtggtagcgtacaagccgtc
tccagttttctgggtaaaccaagctccagtgcaaccactgttgatgctcagtctgccgtt
tatggctacaccgactgggcacatcaacaacgtgttctcgcagaaaatcatcagttagcg
attcgttctggtgctgtagtcgatgcaattggtgctaatagccaaaacatgatcggcggc
agcggtggctcactgagcacaattgataccagtaaagtccgtgccattgatgtgacttac
ggtaaaaacaaatacacctggaagtatggtgtcctcgagatgagttttactctcgataac
ggcgcaaaagtcactgtggggtcaaaagattctgcgtttacttatctaggattagagtgg
aaaactaaaacggttccttatctaggtgttgagtggcgtaccaaaaccgtctcttactgg
ttctttggctggcacactaaacaagtggcttatttagcgccagtatggaaagagaaaacc
atcccttatgccgttcctgtgacactgtcgaaatcgaccacagtacgctatgacattcca
caaggctcacagctcttgggtatgaatgtatggagtaaagagaaacacctctttaaacac
aaacagcaagtcaatgcggtgcagttcctagttggtaaagtgactgctgaccaatcacac
atgggcattgtgtacgcgggttactacgcggttgatatgtacgatgcgcaaggcaacaaa
gtgtggtctgtggctaacgatgacctgaacagcggcaaaattggtgtctccgcttacgac
tttaccggtgatggtattgatgaagtgttggttcaagatcgtttgagaatgcgtattctc
gatggccaaacgggccgtgtgatgggcattattgcgaactcttctggcaccttgtgggaa
tacccagtcgtggcagacttagaaggcaacaataacgcttcactgatcatggttgccaat
gactacgatcgcgaaagccaagtcaaccacggtgtgtttgtgtatgagtccgccaatcca
agcaagccttggcgaaatgcgactcgtatctggaaccagtacgcgtttaatttctcagat
attaacgccaacggtactatcccaacgaatgcacaaccaagctggttaacccacaacagc
ttccgttcagcgaccattcgcgttccgctgaagtaa
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