Vibrio cholerae O1 O395: VC395_2475
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Entry
VC395_2475 CDS
T02099
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VC395_2475 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_2475 (nfo)
Enzymes [BR:
vcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VC395_2475 (nfo)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VC395_2475 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACP10465
UniProt:
A5F5R6
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All DBs
Position
I:complement(2600586..2601446)
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AA seq
286 aa
AA seq
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MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKK
WGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVS
EEACLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCL
DTCHTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGE
IGWECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaagttaatcggggcacatgtatcggcctctggtggtgtcgaactcgcgcca
gttcgagctcatgaaatcggagcgaatgcttttgctctcttcaccaaaaaccagcgccaa
tgggcagctaagccactggaagcgagcagcattcgtgctttcaaagccaattgtaaaaaa
tggggatttggcagtgaggcgattttgccgcacgactcttatctgattaatttaggggct
ccagaacccgagaagctcgacaaatcacgagccgcttttgtcgatgaaatgctgcgttgt
gatcagttagggttaactttgcttaactttcatcccggtagtcatttacagcaggtctcg
gaagaggcgtgtttagcgacaattgctgagtcaattaatcttgcgcatcgtcaagtaccg
aatgtgattgcggtgattgaaaataccgcagggcaggggagtaacttaggttggcgtttt
gagcatctggcggcaatcattgaccaagttgaggataaagagcgggttggcgtatgccta
gatacttgccacacctttgccgcagggtatgatttgcgtacgaaagccgcgtgtgatgag
acattcgctgagtttgagcgagtggtcggtatgcactatttgcgcgcaatgcacatcaat
gattcaaaaggtaagctggctagccgcgttgaccgccatcattccttaggtatgggagag
attggctgggagtgttttgaatatatcgcgcaagatgctcgatttaacggtatccctctg
attttagaaacgattgatcctgacatttgggcgactgagatcgcaacgctacgcaaattt
tcgacgcaaaaagagaattaa
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