Vibrio crassostreae: IS519_21340
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Entry
IS519_21340 CDS
T08776
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00470
D-Amino acid metabolism
vcra00550
Peptidoglycan biosynthesis
vcra01100
Metabolic pathways
vcra01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IS519_21340
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IS519_21340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IS519_21340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
IS519_21340
Enzymes [BR:
vcra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IS519_21340
Peptidoglycan biosynthesis and degradation proteins [BR:
vcra01011
]
Precursor biosynthesis
Amino acid ligase
IS519_21340
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
UPR31406
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All DBs
Position
2:1134248..1135243
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AA seq
331 aa
AA seq
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MNTTNILLLCGGGSSEHEVSLVSANYLFEQLNSVADFNVVRVEIKNEGWCLDSGELVYLD
INDQTLRGDNLASKVDFIVPCIHGFPGETGDIQSLFEMAKIPYLGCGSEASNNSFNKITS
KLWYDALGIPNTPYLFLSDNNDQAHSQATQAFENWGKVFVKAARQGSSVGCYQVNQVEDL
SEAINKAFTFSDQVLVEKSVVPRELEIAAYEIDGELHISKPGEVIAPNGAFYSYEEKYSA
DSHSITEVEASNLTDEQRELIADSARKVFTQMKLRHLSRIDFFLTQDNEIYLNEVNTFPG
MTPISMFPKMVEHDGHKFSQFLENCVRTSLS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccacaaacatccttctactttgcggcggtggatcttcagagcatgaagtgtct
ttagtttcagccaattacctttttgaacaactcaatagcgttgcagattttaatgttgta
agagttgaaattaaaaacgaaggctggtgtcttgattcaggtgaattggtttatcttgat
attaatgaccaaaccttacgcggtgacaatttagcatctaaagtcgatttcattgtgcct
tgcatccacggtttcccaggtgaaacaggtgatattcaatccctgtttgaaatggctaaa
attccgtacctaggttgtggttcagaagcgagtaacaacagctttaacaaaatcacgtca
aagctttggtacgacgcactcggtattccaaacaccccgtacctgttcttatcagacaac
aatgatcaagctcactcacaagcaactcaagcatttgaaaattggggtaaagtgttcgtg
aaagcggctcgtcaaggttcttctgtaggttgttaccaagttaaccaagtagaagattta
agcgaggctatcaacaaggcgtttactttctcggaccaagtattggttgagaaatcagtg
gtgcctagagagctagaaattgctgcttatgaaatcgatggcgagctacacatcagcaag
ccgggtgaggtgattgcaccgaacggcgcattttactcttacgaagagaagtacagtgca
gacagccactcgatcactgaagttgaagcaagtaatttaactgacgaacagcgtgaattg
attgcagacagcgcacgaaaagtcttcacccagatgaagcttcgtcacttgtctcgtatc
gacttcttcttaacgcaagacaacgagatctacctgaacgaagttaacaccttcccaggc
atgacgccaatctccatgttccctaaaatggttgagcatgacggccacaaattcagccag
ttcttggagaattgcgtgagaacgagcctttcttag
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