Vibrio cholerae O1 El Tor MS6: MS6_0107
Help
Entry
MS6_0107 CDS
T03666
Name
(GenBank) polysaccharide deacetylase
Organism
vcs
Vibrio cholerae O1 El Tor MS6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_deac_1
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_4_2
Glyco_trans_1_4
Glycos_transf_1
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
BAP01762
LinkDB
All DBs
Position
1:complement(121930..123702)
Genome browser
AA seq
590 aa
AA seq
DB search
MNILMALSQLEVTGAEVYATSVGNELTRRGHQVFYVSDTLTKAHDGLFFKLRFNKRSIPR
RFWHVAYLVYLIKKHQIQLVHAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFH
AMGDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIFKRSAAPNNPKPVISIIGRLS
GPKGELCYRLLTECLDLDRYQVQVITGTPLTERFSALQDKVSFPGYSANVEQIMAQSDLV
IGAGRVAMEALLCGRPTLAIGEASCVGIIELDNLNQAMATNFGDIGPHDLAIDFQQIPAL
IEQGLSQPHCTQEITEQIKLNYDLQVIVNELENLYQTFYVNKLQREVPIIMYHRFIRDDS
EKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGKRFIIITVDDGYRD
NYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEI
GGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGY
PFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFGLWRKVKGNYLFRKMNKK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgatggccctatcccaactcgaagtaacgggagctgaggtgtatgccact
agtgtaggtaatgagctcactcgacgtggccatcaggtattttatgtttccgatacgctc
accaaagctcacgatggcctgttttttaaactgcgctttaataaacgcagcatcccgcgg
cgcttttggcatgtcgcctatctggtttacctgatcaagaaacatcagatccagttagtc
catgctcactcacgagcatcaagctggagttgccatattgcctgccgcttgactaataca
ccaatggtgaccacggtccatggtcgtcaaccggtacatgtttcgcgcaaaaaattccat
gcaatgggagataaagcgcttccggtttgtgaagcgatacgagagcaattaatcaaagat
ctcaatgtaccggagagccaactgcacgtaagccgtaatgggatagaaacaagtatcttt
aaacgcagcgcagcacccaataatcctaagccagttatctctatcattggccgactcagt
ggccctaaaggtgaactttgctataggttgctaaccgagtgtttagacctcgaccgctac
caagtacaagtgatcacaggtacaccgttaactgagcgttttagcgcactgcaagataaa
gtctcatttcccggctacagcgccaacgttgaacagatcatggctcaatcagatttggtg
attggtgcaggacgagtcgcgatggaggcactcctatgtggccgcccgacccttgcgatt
ggtgaagcaagctgcgtggggattatcgaactggataatctaaaccaagccatggcaacc
aattttggcgacatcggtccacacgatctggcgatagatttccagcaaatccccgctttg
attgagcaaggcctaagtcaaccgcactgcactcaagagatcactgaacagatcaagctt
aactatgatttacaagtgattgtgaatgagcttgaaaacctttatcaaacgttttatgtc
aacaagttacaacgagaagtccccatcatcatgtaccaccgctttattcgtgatgacagc
gaaaaaggtgtacatggtacttatttgcatgttcagcagcttgagaaacattttcagttg
cttaaaaagatgggctttgaaactctgaccttcaaagatctctctgagaagggatttatt
catcgcttacaaccaggtaagcgttttatcataattaccgtggatgatggctatcgcgac
aactatgacttgttactgccactgctcaaaaagtatcaatttaaagccgtggtgtatgtg
gtgactggcgagaattttaatcgctgggatgtcgaagtgagtgacaaccctgaaaaagtg
gtccctttgatgtcaccggagcaagttaaagcgttacatgactctggattagtagagatt
ggtggtcatacgatgactcatccctttttgagtaagctcagtgaatcggaacaacgcgaa
gaaatattgcgcaacaaactcgaacttgaagcgctaatcggagagccactgacctccttt
gcttatccttatggtgaccatgatgcaacctctaaacaactggctcaggatctgggttac
ccatttgccgtagcgaccaacagtggtccacttttgatgcatcaagatccctatcaaatt
cgtcggattgcgatttttccaagaaccgacacttttggtctgtggcgaaaagtgaaaggg
aattatctatttagaaaaatgaacaaaaaataa
DBGET
integrated database retrieval system
