Vibrio cholerae O1 El Tor MS6: MS6_0718
Help
Entry
MS6_0718 CDS
T03666
Name
(GenBank) hypothetical protein
KO
K20921
polysaccharide biosynthesis protein VpsD
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs00543
Exopolysaccharide biosynthesis
vcs05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
MS6_0718
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MS6_0718
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcs01003
]
MS6_0718
Glycosyltransferases [BR:
vcs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
MS6_0718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
BAP02373
LinkDB
All DBs
Position
1:831707..832855
Genome browser
AA seq
382 aa
AA seq
DB search
MSKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEI
IQLSKHLEVVICPLREKRFGLPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKT
RNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFYTCVGEELRQALSLETNKSIQ
VIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAP
LEMMAAGLPLISTPVGILGERQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYL
RDQFAVENVIEHYQNLYREVLS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatattgcttatcatgccactctctacgctcaattggggggagaaaaatctt
ggtggtgtggattcagtatgccaaatgttggtacgtcaactcgctcagcaagagcgtcca
taccattaccgagtgttagcgtttgatccgctcaacaatcactcttattcaggcgagatt
atccagttgtcaaaacatctggaagtggtgatttgtccgttgcgggaaaagcgatttggg
ctgcctttgcctagcttattatccaattggctccgcatccaagagcaactgaaagactat
cagccagatttggttcactctcatctcaacagttggatgatgggacttgggcagaaaact
cgtaatgtgttgaccttgcattcttatcgcaagattgggcgtaagccagtttcaaaactc
aatgattttgtttatgaacaaatcattccatgggtaagtcatttttccgtcgatttttat
acttgtgttggcgaagagttgcgtcaagcgttatctctggagacgaataagtcaattcaa
gtgattggcaatccagtcgatcctgactatttctctgccaactctgcgaaccagaatctg
ccccagaatgaagtcaatttagtcacttgtgcattgattactcgacgcaagcgtattgat
cgagccattgtattactgcgtgagctaaaacagcgagggcaagcggctactttacgtatt
atcggacccaatatggattctgcttattacgcgcaattgcagcaattgatcaaagagtat
gagcttgaacaagatgtcatttttcttggcaaacttaatcagcgtgaaattgtacaacag
taccaacaagcgaatattggaatatttacgtcacaacaagaaacgttcggcttagcgcca
ttggaaatgatggcggcgggcttgccattaattagtactcctgtcgggattttaggtgaa
cggcaagcaacgtttgaccagttaggggtggtttttatgcaagaagggcaggaagcgatg
attgctgagcgaatcagtcagataaaaataacggatactcaagcgattcaaacctatttg
cgcgatcaattcgcagtagaaaatgtgattgaacattaccagaatctatatcgagaggta
ctgagttga
DBGET
integrated database retrieval system
