Vibrio coralliilyticus OCN014: JV59_18170
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Entry
JV59_18170 CDS
T03497
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct03030
DNA replication
vct03430
Mismatch repair
vct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JV59_18170
03430 Mismatch repair
JV59_18170
03440 Homologous recombination
JV59_18170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vct03032
]
JV59_18170
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_18170
Enzymes [BR:
vct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JV59_18170
DNA replication proteins [BR:
vct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JV59_18170
DNA repair and recombination proteins [BR:
vct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JV59_18170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
PsbU
CAF1
Motif
Other DBs
NCBI-ProteinID:
AIS56976
LinkDB
All DBs
Position
2:complement(497763..498482)
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AA seq
239 aa
AA seq
DB search
MFKNMMRAPAIDWEKKFQAKQQTSRNDSLKRYYSAGVPSADTNLEDVTFLAMDFETTGLD
SEQDDIITIGTVPFNLNRIFINQAHHWTVRPRQQLAEESVIIHGITHSDILDAPDLSEVY
DQVLQQMAGKIMVVHYQRIEREFFDRALKDRINEGIEFPVVDTMHLETLYQQRLHGGILN
KVLGKKPDSVRLGASRVRYGLPPYTPHHALTDAVATAELLQAQIAYHYERSTKLNQIWI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaatatgatgcgtgcaccagcgattgattgggaaaagaagtttcaggcgaaa
caacagactagccgaaatgactcactcaagcgttactacagcgctggagttccaagtgcc
gataccaatctggaagatgtgacctttctagccatggattttgaaaccactggtttagat
tcagagcaagatgacatcatcaccattggaactgtgccgtttaatctcaacaggatcttt
attaatcaagctcatcactggacggtacgacctcgtcagcaactggctgaagaatcggtg
attattcacggtatcacccacagtgatattctcgatgcaccggacttatcggaagtttat
gatcaagtcttgcagcagatggcaggcaaaatcatggtggtgcactatcagagaattgag
cgagagttttttgatcgagcactcaaggatcgtattaatgaagggattgagtttcctgtc
gtcgataccatgcaccttgaaaccctctaccaacaacgcctacacggcggaatactaaat
aaagtgctaggtaagaagcctgattcagtccggttaggtgcaagccgagtgcgttatggt
cttcctccgtacacgccacatcatgccttaaccgatgcagtcgccacagcggagttgtta
caggcgcaaatcgcctatcattatgaacggtcaacaaaactcaatcagatttggatctga
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