Venatoribacter cucullus: GJQ55_05840
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Entry
GJQ55_05840 CDS
T07641
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJQ55_05840 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcw03400
]
GJQ55_05840 (recB)
Enzymes [BR:
vcw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GJQ55_05840 (recB)
DNA repair and recombination proteins [BR:
vcw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJQ55_05840 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
SLFN-g3_helicase
ResIII
DUF3799
Motif
Other DBs
NCBI-ProteinID:
QQD24031
UniProt:
A0A9X7YNW3
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All DBs
Position
1235869..1239537
Genome browser
AA seq
1222 aa
AA seq
DB search
MKTLNIADFPLHGQRLIEASAGTGKTFTIAGLYNRLLLGHGRRSDAQQPARLACDQILVV
TFTVAATAELRGRIRARLRNTFEDCLRLENNQPMQDQQTYQYLLELAQQRGQTEAELHSS
VQAELKPWLQANLALMDEASIYTIHGFCQRMLKQFAFDSGVMFSAEMVLDSERYLLQACE
DIWRQHAYRLNEPQSRFLLSQYAGPQALMQTVRSRLARPDMTIIPGLPTADFESLWAQTE
AAFLALQAQCRDTSVADLAQLIADSGLDKRSYNSKHTPNWLGQLMAYGLGDFYPQPPECS
ERFTQAFMNEKLKSGELPQHPVFSALEALLPSVNQLNRLLDLAWQERIAARYFELLEQAG
ALTPDDLLRLLQAALAGPQGERLAAHIRRLYPVAMIDEFQDTDARQFDIFNRIYPPAEAG
ENPDDQHHSLIMIGDPKQAIYAFRGADIFTYIKARRNLTDEQRFTLDTNWRSHSQLIKGV
NQLFAGNASPFIFDQDIEFIQVKAGGRHDNNGFAANGQAQIPLQLWHDGKEYSRHGAQHA
TASQCAEKIAALLNGAGTLAGQPVQARDIAVLVRSRKQAGWIRDALAQQNIGSVFLTRDS
VFESQEALDVFRWLEAIAHPGDERIVRSALATETQGYSAERLHQLLNDESEWETVLQTHQ
DYHQLWNRRGIMAALLKWLESDGRAQRLRCLPQGERRLTNLLHLGELLQSASRRLRGHEA
LLRWLGEHVFSEESSGDEAQLRLESDANLVNIVTIHKSKGLQYPLVFLPYCWDDNYLPNG
KADTCYFDDKLGMVLNLDPDADAKDMAIRDALAESLRLLYVALTRAEQGCFVWLMDAVDG
RSKKEKKSTIAHSALGYLLNLQQNPDWAELHQRANADVYIGDLPKWPAAVASQSDSVAAN
IAARTIQPRRYDSWRVTSYSQLADGHAPTEAAALPLAEATLRDDEFSTANENAPEQATVT
PAEPGKPHPVFTFAKGANAGTCLHAILEKWDFHDTQALNTLVMQQLARYGLLVADEQEQA
EQCRQVADWLQAIVQSPQQDQQGTVFCLADIQPGQRLDEMEFYLPVAGLKPYQVDQLLHS
QNPRFQFHEISGYLKGFIDLIFAHNGRYYVADYKSNHLGNRPQDYHPEALQQAMQEHRYD
LQAWIYTLALDQLLRQRLPDYDPQQHLGGVFYYFLRGMPFAADAADAAGLETAQPSAGIY
YLPPDWPQLQRWQRVVCQGEPV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactcaacattgccgattttccactgcacggtcagcgcttaattgaagccagc
gccggcaccggcaaaacctttaccattgccggcttgtataaccgcttattgctcggtcat
ggccggcgcagtgacgcgcaacaaccggcgcggctggcctgcgatcagattctggtggtg
acctttacggtggctgccaccgcggaattacgcggccgtatccgtgcgcgactgcgcaat
acctttgaagattgtttgcggctggaaaataaccagcccatgcaggatcagcaaacctac
caatacctgctggagcttgcgcagcaacgtggccagacggaagcggagcttcacagcagt
gtacaggccgaattaaaaccctggctgcaggccaacctggcgttaatggatgaagcctcc
atttacaccattcacggtttttgccagcgcatgctgaagcagtttgccttcgacagcggc
gtgatgttcagcgccgaaatggtgctggatagcgagcgctatttgctgcaggcctgcgaa
gatatctggcgtcagcacgcttatcgcctgaacgaaccgcaaagccgctttttgctcagc
cagtacgccggcccgcaagccttaatgcagacggtgcgctcgcgtctggcgcgcccggat
atgacgataataccgggcctgccaacggcggattttgaaagtctgtgggcgcaaacggag
gcggcatttctggccttacaggcgcagtgccgcgataccagcgtggcggatttagcgcag
ttaattgccgattccgggctggataaacgcagctacaacagcaagcacacgccgaactgg
ctgggccaacttatggcctatgggctgggggatttttatccacagccaccggagtgcagc
gaacgctttactcaggcgtttatgaacgaaaaactgaaaagcggcgagctgccacagcat
ccggttttcagcgcgctggaagccttgctgccgtcggtgaatcagcttaaccgtctgctc
gatctggcctggcaggaacgcattgctgcgcgctatttcgagttactggaacaggccggt
gcgttaacgccggacgatttattgcgcctgctgcaggcggcgttggctggcccgcagggc
gaacgcttggccgcgcatatccgccgcttatacccggtagcgatgatcgacgaatttcag
gataccgacgcgcgccagtttgatattttcaaccgcatttatccaccggcagaagccgga
gaaaacccggatgatcagcaccacagcctgattatgatcggcgaccccaaacaggccatt
tacgccttccgcggtgccgatatttttacctacattaaagcgcggcggaatttaaccgac
gagcagcgctttaccctggacaccaactggcgcagccacagccagttaattaagggcgta
aatcaattatttgccggcaatgcctcgccttttattttcgatcaggacatcgaatttatt
caggtgaaggccggtgggcgccacgacaacaacggctttgccgccaacggtcaggcgcag
attccgctgcagctgtggcacgacggcaaagaatattcccgtcacggtgcgcaacatgcc
actgccagccaatgcgccgaaaaaattgccgcgttattaaacggcgcgggcacactggcc
gggcaaccggtacaggcgcgcgatatcgcggtgctggtgcgcagccgcaaacaggcgggc
tggattcgggatgcgctggcgcagcagaatattggcagtgtgttcttaacccgcgattcg
gtatttgagagccaggaagcgctggatgtcttccgctggctggaagccattgcccacccc
ggtgatgagcgcattgtgcgctcggcgctggcgaccgaaactcagggctacagtgccgaa
cgattgcaccaattactgaacgatgagagcgaatgggaaacggtgctgcaaacccatcag
gattatcaccagttgtggaaccggcgcggcattatggcggcgttgctgaaatggctggaa
agtgacgggcgcgcccagcgtttgcgctgtttgccgcagggcgaacgccgcctcaccaac
ctgctgcatctgggtgaattattgcaaagcgccagccgccggctgcgtggccatgaggcg
ttattgcgctggctgggcgagcacgttttcagcgaagaaagcagcggtgacgaagcgcag
ttacggctggaaagcgacgccaatctggtcaacatcgtcaccattcataaatccaaaggc
ctgcaatacccactggtatttttaccctattgctgggacgacaattacctgcccaacggc
aaagccgacacctgttatttcgacgataagctcggcatggtgctgaatctggacccggat
gccgatgccaaagacatggccatccgcgatgccttagcagaaagcctgcgcctgttgtac
gtggccttaacccgtgccgagcagggttgttttgtgtggctgatggatgccgtggatgga
cgcagtaaaaaagagaaaaaatccaccatcgcccattcggcgctggggtacttgctgaat
ctgcaacagaacccggactgggccgaactgcatcagcgggccaacgcggatgtgtacatc
ggtgatttacccaaatggccggcggcagttgcttcacaatcagacagcgtcgccgcaaac
attgccgcccgcaccattcagccgcgccgttacgacagctggcgcgttaccagttacagc
cagttggccgatggacatgcgccgaccgaggcagcggccctgccactggccgaagccacg
ctgcgtgatgacgaattttccacggccaatgaaaatgcaccagaacaggcaaccgtaaca
ccagcagagccgggcaagccgcatccggtgtttaccttcgccaaaggcgcgaatgccggt
acctgcttacacgccatactggaaaaatgggattttcacgacacgcaggcgctgaacact
ctggtgatgcaacaactggcccgttacggtttgctggtggccgacgagcaggagcaggct
gaacaatgccgtcaggtggccgactggctgcaggccattgtgcaaagcccgcagcaggat
cagcagggcactgtattttgtctggccgatattcagccggggcagcggctggatgaaatg
gaattttatctgcccgtggcgggcttaaagccttatcaggtggatcagctgctgcacagt
cagaaccccagatttcagttccatgagatcagcggttatctgaaaggctttatcgacctg
attttcgcccataacggccgttattacgtggccgactataaatccaaccatctgggtaac
cgcccgcaggattaccacccggaagcgctgcagcaggccatgcaggaacatcgttacgat
ctgcaggcgtggatttacacactggcgctcgatcagctgttgcgtcagcgactgccggat
tacgacccgcagcagcatctgggcggcgtgttttattacttcctgcgcggtatgccgttt
gcggcggatgctgcggatgccgccggtttggaaacggcgcaacccagcgccggtatttat
tatttgccgccggattggccgcagctgcaacgctggcagcgggtagtgtgtcagggagag
ccggtatga
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