Vibrio cholerae O49 1154-74: VAA049_112
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Entry
VAA049_112 CDS
T03828
Name
(GenBank) EAL domain protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA049_112
Enzymes [BR:
vcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VAA049_112
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
DUF6662
Motif
Other DBs
NCBI-ProteinID:
AKB02645
LinkDB
All DBs
Position
116434..118923
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AA seq
829 aa
AA seq
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MFTVSRLIPDLASANQVLEMMDLPHGQSILVQIFSPLSREHVVQLARLIRSRHPQACLLG
CSTEEVIFQGEVHHQVTLLQITVFEQTYLSRAVVDYSDDEAADAERLARQLELTSTSRAV
VCFSWQMDTLQAARFALRDTQGAPVPVAGGAAKQTPSGRWVLLDEACYQNASVAIALHGE
ALYVETGGYTEWQPVGRTYRVTAVEGDRVLRLDDEPIEAIYQRNLGAQADLPHDWLISFP
LMKGECRHQDLYLPLGLAEEGGLRFNRPLALQDEVRFCFDHPSLTLERVYLTAQQLQAKQ
CQQVWVFNCALRLNFMHENHELQPLQAVAPTDGCYCWGELLYEHGQQQVMHHSMTFLALR
EGAVRDDLVPIPLPSYPEGMTSPLFNLIRHAFHDLDAMTDNLAQQIRAQTSLLTASYRRD
RRTGLPNRVVLRERLANFAANEHLIALKVTNFNQINEKYGYPVGDKLLRDLSEQFQVFLD
QKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSIS
LCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRV
SRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDEGEIILPGNFLPIITDTHLYTRLSR
QMITHTFNMMRHRPEAFSINLSPQDLMSERTLQHLEAAIKSVAAPARVGLEVLESEQIKD
YGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRI
AEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRPSRLG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtctcgcgtctcatcccagatttagcatcggccaatcaggtgctcgaaatg
atggatcttcctcatgggcaatccatcttagtgcaaattttctctcctttgagtcgcgag
catgttgtgcagcttgcgcggctcatccgtagccgtcatccacaagcttgcctgcttgga
tgcagtaccgaagaagtgattttccaaggggaagtgcaccatcaggtgacgttgctgcaa
atcaccgtgtttgagcaaacttatcttagccgtgctgttgtggattacagtgacgatgag
gctgccgacgcggagcgtttagctcgccagctcgagctcactagcacgtctcgagcagtg
gtctgtttttcttggcagatggataccttgcaagccgcacgatttgccttacgcgacacg
cagggtgcgccagtgcccgtcgctggtggagccgccaaacaaactcccagtggtcgctgg
gttttgctcgatgaggcttgttatcaaaacgccagtgtggccattgcgctgcatggcgaa
gcgctttatgtcgaaactggcggttacacggagtggcagcctgttgggcgcacctatcgg
gtcacagctgtagagggggatcgggtcttacgtttggatgatgagccgatagaggcgatt
tatcagcgcaatttgggcgcacaagccgacttaccccatgactggctgatcagttttcca
ctgatgaaaggggaatgccgccaccaagatctttatctgccgctcgggctggcggaggaa
ggcggactgaggtttaaccgcccactggcgctgcaagatgaagtgcgcttttgttttgat
cacccgagtttaactctagagcgggtctatctcaccgctcagcagctgcaagccaagcag
tgtcaacaagtatgggtgtttaactgtgcgctgcgtttaaacttcatgcatgagaatcac
gagttacaaccgcttcaggcggtggcgccgaccgatggttgttactgttggggagagctg
ctgtatgagcatggtcagcagcaagtgatgcatcatagcatgacgtttcttgccttgcgt
gaaggggcggtgcgtgacgatcttgtcccaatccccttgccgagttatccggaagggatg
acgtcccctctgtttaatttgatccgccatgcgtttcacgatttggatgccatgacggac
aatttggcacagcagatccgcgctcaaacctcattactgacggcgagttaccggcgtgac
cgacgtaccggcttacccaatcgagtggtattacgtgagcgattggcgaacttcgcggcc
aatgagcacctaatcgccctgaaagtgaccaacttcaatcagatcaatgagaagtacggt
tatccggtaggcgataagctgcttcgtgatttgagtgaacagtttcaggtctttttggat
cagaaattggcagggcaaagcggtttgtatgcgattggggtcggtgagtgggcaacggtt
tttcgtgccaagctggacgggaaaagtattcatagccatttctatcagtttgtggagcag
ttggagcacgtcaacttcgaaccctacggtttgccgaatgtggattatctgtcgatctcg
ttgtgcgctgggttagtcagtcagggcgattttgcagagcattcgccggatgagctattg
ctgcgtgctatcgaagcgcgccgctacgcgtttaacaacaaccaccatttctgtaatgca
gcgcgtttaaaagtgcaagaaagtgttcgtcaggagcggctgaattggctatcgcgggtt
agccgcgcggtggtacgtgatgatgtggtggtttatgcgcagccgatttgtcaggcgcgt
agtcacattgtggcttcctacgaatgtttagtgcggattgaagatgaaggggaaattatc
ttgcctgggaattttctcccgatcatcaccgatactcacctctatactcgtttgagccgg
cagatgataacgcataccttcaatatgatgcgtcatcgcccggaagcgttttcgatcaat
ctttcaccgcaagatttgatgagtgagcgcaccttgcagcatttggaagcggcaatcaaa
tcggtggctgctcccgcccgtgtcgggctcgaagtgttggagagcgaacaaatcaaagat
tacgggcggatgattgaagtgtgtaaccatttccgcacattgggcgcaaccatcattgtc
gatgattttggcagtggttattccaatattgatgagatagtgaagcttgagccgcaggtg
attaagctcgatggcagcttgatccgcaatattgatcaggatgtgaagcagcgccggatt
gccgagcagctcgtgaaattgtgtcaggtactgaatgcgaaaaccgtggcggagtttgtc
cataaccagacggtttgtcgcatcagtgaagatatgggtgtggattatttacaaggctat
ttcttgggtcgaccttcacgcttaggttaa
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