KEGG   Vibrio cholerae O49 1154-74: VAA049_3164
Entry
VAA049_3164       CDS       T03828                                 
Name
(GenBank) tRNA pseudouridine synthase, TruD family protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
vcx  Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vcx03016]
    VAA049_3164
Enzymes [BR:vcx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     VAA049_3164
Transfer RNA biogenesis [BR:vcx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VAA049_3164
 Prokaryotic type
    VAA049_3164
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AKB01888
LinkDB
Position
complement(3508319..3509404)
AA seq 361 aa
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGSGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFVVTLSEVSDVPAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVYGD
LALWDQRLQAGEVAISAALAGDNALPTSGQALQLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQKLSWQVQEDQITLRFSLDAGSFATSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaccgatattctctctcctctggcttatttgtgcggtaaaccgactgcgaaagccaaa
ctcaaagccctaccagagcactttcaagtcaacgaagtgttgggttactccttaactggc
agtggggaacacttaatggtgcgtattcgtaagacaggggagaataccagctttgtggcc
aatgaattagccaaggcttgtggcgtgccttcacgcgcggtgagttgggcggggttgaaa
gatagacacgccgttactgagcagtggctgagcgtgcatctgccgaatggcgaaacgccg
gacttctctgcgtttctggcacaataccctagcattgaaattctagaggtgactcgccac
gacaaaaagctgcgtccgggcgatttgcaaggcaatgaatttgttgtcactttatcggaa
gtcagcgatgttccagccgtattaagccgtttagaaacggttgctgaactgggcgtaccc
aattactttggtagccagcgttttgggcgtcatggcaataacctcagtgaagcgcgccgt
tgggggcgtgataatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgcg
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgaacagggctgttttgcc
cgctttattgaaggtgatatcgctttagctgagcagcaaatgtttaatgtttatggtgat
ttagccctttgggatcagcgtttgcaagctggagaagttgcgatttcagcggctttggcg
ggtgataatgccttgccgacttcgggtcaagccttgcaactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccggggtaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaaattaagctggcaagtgcaagaagatcaaatcactctgcgt
ttctcattggatgcgggtagctttgccacttccttagtgcgtgaattgatcgaagagatc
ccagtggtacgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa

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