Vibrio cholerae O27 10432-62: VAB027_1809
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Entry
VAB027_1809 CDS
T03829
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VAB027_1809 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcz03016
]
VAB027_1809 (trmU)
Enzymes [BR:
vcz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
VAB027_1809 (trmU)
Transfer RNA biogenesis [BR:
vcz03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VAB027_1809 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
Arginosuc_synth
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
AKB05503
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Position
complement(1928810..1929925)
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AA seq
371 aa
AA seq
DB search
MSVEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDL
ADAQAVCDKIGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFA
DEVLDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVGEL
EKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEHQ
GLMYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLH
WVDRTPITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEI
CLGGGIIEERI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagagcacagcgcaaacagccaaaagaaagtgattgtcggtatgtctggaggg
gttgattcctctgtttcagcctatcttctcaagcaacagggttaccaagtggaaggcctg
tttatgaaaaactgggaagaagacgataacgaagagtattgtactgcggcagaagattta
gccgatgctcaggcggtgtgtgacaaaatcggcatcccacttcataccattaacttcgca
gcagaatactgggataacgtatttgaatacttcctcgcggaatataaggcgggacgtact
cctaacccagatattttgtgtaataaagagatcaaatttaaagccttcttagaatttgct
gatgaagtgctggatgcagactacatcgccatggggcactatgtgcgtcgcaccttcccg
cagaatggcgaaaaaccgcaaatgctgcgcggtttagacggtaataaagaccaaagctac
ttcctttatactctgagtcatgagcaagtggcgcgtagcctattcccagtaggtgaacta
gaaaaacctgaagtacgccgcattgccgaagaacaaggcttaattaccgcgaagaagaaa
gattcaaccggtatttgttttatcggtgagcgcaaatttaccgacttcttatctcgctat
ttgccagcccaaccgggtaaaattgaaaccccggaaggcaaagtgattggtgagcaccaa
ggcttgatgtaccacactctcggacagcgtaaaggtctgcacattggtggtatgaaagag
agcagcgaacagccatggtatgtggcggataaagatctcaaacgcaacgtactcatcgcg
gtacaaggcgcggatcatcccctactcaaatcgcatggtttggtggcggctcagttacat
tgggttgatcgcacccccatcacagaacctgtacgttgcagcgtgaagacgcgttatcgt
caaagtgacatcgcttgtaccatcattccgctgagtgatgaccgcatcaaagtgatgttt
gacgagccacaagtggccgtgactccgggacaatccgccgtcttttatcaaggtgaaatc
tgccttggtggcggcattattgaagagcgcatttaa
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