Vibrio cholerae O27 10432-62: VAB027_1913
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Entry
VAB027_1913 CDS
T03829
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VAB027_1913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_1913
Enzymes [BR:
vcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
VAB027_1913
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VAB027_1913
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VAB027_1913
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VAB027_1913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKB05832
LinkDB
All DBs
Position
complement(2041062..2042486)
Genome browser
AA seq
474 aa
AA seq
DB search
MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE
AALITGITPQKANSQGLAEPEFIARIHAELSTPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHY
TSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYMRYEDLAPDELPVPVKLV
HLNKCPILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVFSQEREFNQES
DVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYRARHYPHTLTD
AEQRRWAAHCRDYFERNLEGYMLNLENLVHEHQADPKKMAILKSVYHYVEKLAC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagaacaccagcccacattcttttttttcgactacgagacttggggagtcaat
cccgccaaagatcgtcctagtcagtttgcgggtgtgcgtaccgatatggacttcaacatc
atcggtgagcctttggtgatttactgtcaactgcccaacgactatttgcccgctcctgaa
gccgcattgatcacagggatcacccctcaaaaagccaatagccaaggtctggcggagccc
gaatttatcgcgcgtattcatgcagaactctccacacccaataccaccagcctaggttat
aacagcatacgttttgatgatgaagtgacgcgctacacctgctatcgcaactttatcgac
ccctatgcttggagctggcaacacggcaattcccgttgggatctgctggatgtgcttcgc
gcgtgtcatgctttgcgtcctgaaggtatcgagtggccggaaaatgatgacggctttacc
agctttaaactggaacatctttctgttgccaacggcattgagcacagcaacgcgcacgat
gcgatggccgatgtgattgccaccattgaactggcgaaaaaagtcaaagccgcgcagccg
aaattgttcgactacttcttcactatgcgccacaaacgcaagctgacagaactgattgat
attgtgaaccaaactccgctgatgcatgtttctggcatgcttgggcgtgagcgccactac
accagctggattgtgccgattgcttggcatccgaccaatcaaaatgcggtgattgtggtg
gatttgggtaaagaccctcagccgctgctggagctcgatgccgaaacgctgcaagcgcgt
ctctatatgcggtatgaagacctagcaccggatgagctaccagtacccgtgaaattggtg
catctcaataaatgccctattctggctccggccaaaaccttgaccgcagaaaatgcacaa
aagattggtattgaccgcgaacagtgtctcgcgcacttgaatgtgattcgtcaacatccc
gagattcgtgaaaagctggtgacggtatttagccaagagcgcgagtttaaccaagagagt
gatgtggatagccaactctatgccggctttttctccccagccgatcgcgcggcgatggag
atcatccgcaccactgcaccggagaatctgggcagcttagcgatacaggtggcagataag
cgcattgaaccactgctgtttcgttatcgtgcgcgccattatccccataccttaaccgat
gccgagcaacgccgctgggcagcgcattgccgtgactatttcgagcgcaatctagaaggt
tatatgttgaatttggaaaatctggtccatgaacatcaagctgatccaaagaaaatggcg
attttaaaatccgtctaccattacgtggaaaaactcgcttgctaa
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