Verticillium dahliae: VDAG_09308
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Entry
VDAG_09308 CDS
T03450
Name
(RefSeq) GIY-YIG catalytic domain containing protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_09308
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
VDAG_09308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
zf-HC5HC2H
T5orf172
Prok-RING_1
FANCL_C
DUF3090
Motif
Other DBs
NCBI-GeneID:
20710771
NCBI-ProteinID:
XP_009653905
UniProt:
G2XGM6
LinkDB
All DBs
Position
4
AA seq
324 aa
AA seq
DB search
MAVLSRPIPALYTVYILRSTVRHASLYIGSTPNPPRRLKQHNGLARGGAARTSRSSLRPW
EMIAIVSGFPSMIAALKFEWALTNPHLSLHIPSESRISRAAGVKKNGHPKRPRPGITSIM
SNLHLLLRVPSFERWPLKLHFFVKTAHKAWNDSCAAAEKPVRKGLQILTDFGPGGTMATD
AEAAGEAGESSTAAPGTEENWGVHALPLDHAPMKDFVEKGRSIVTFEREGACVVCKEPLE
HGRGLHVICSNGSCEGAGHLSCWSRHLLAQESSEEAVLPVAGPCPCCRSEVRWDDLMREL
SLRVRGEGEVDKLLKVKKKRQAKT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcctttccaggccgattcccgcgctttacaccgtctacatcctgcgctccacc
gtccgccacgcctccctctacatcggctcgacccccaatccgccgcgccgcctcaagcag
cacaatggtctcgcgcgcggcggcgctgcccgcacgtcgcgcagcagcctgcgaccgtgg
gaaatgatcgccatcgtctccggcttccccagcatgattgccgctctgaaattcgagtgg
gcgctgacgaacccgcacctctcactgcacatcccgagcgagtcgcgcatctcgcgcgcc
gcgggcgtcaagaagaatggacaccccaagcgtccgcggcccggcatcacgtccatcatg
tcgaacctgcacctgctgctgcgcgtgccgagcttcgagcggtggccgttgaagctgcac
tttttcgtcaagacggcgcacaaggcgtggaatgacagctgtgccgctgctgagaagccg
gtcaggaagggccttcagatcctgacggactttgggcctggcggaaccatggcgacggac
gccgaggcggctggcgaagctggagagtcgtcgacggcagctcccggcacagaagagaac
tggggcgtccatgcgctgcctctcgaccacgcgccgatgaaggatttcgtcgaaaaggga
cggtccattgtcacgtttgagagggagggcgcgtgtgtcgtttgcaaagaaccattggag
catggcaggggattacacgtcatttgctcgaacggcagctgcgagggcgcgggacacttg
tcctgctggagccgccatcttctggcccaggagagcagcgaggaagctgttttgcccgtg
gcggggccgtgcccgtgctgcaggagtgaggtccggtgggatgacttgatgagggaactg
tcgctgcgagtcaggggcgagggcgaggtggacaagcttctgaaggtcaagaagaagcgt
caagcgaagacatga
DBGET
integrated database retrieval system
