Vibrio sp. EJY3: VEJY3_00840
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Entry
VEJY3_00840 CDS
T01683
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vej03016
]
VEJY3_00840 (rph)
Enzymes [BR:
vej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
VEJY3_00840 (rph)
Transfer RNA biogenesis [BR:
vej03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VEJY3_00840 (rph)
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AEX20667
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All DBs
Position
1:195503..196219
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AA seq
238 aa
AA seq
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MRPNDRKADQVRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEESVPRWLKGQGKGWVT
AEYGMLPRATHSRTRREAANGKQGGRTMEIQRLIARSLRAVVDLKAMGEFMITVDCDVIQ
ADGGTRTASISGASVAMADAFQHLIESGKLKANPMKGHVAAVSVGLLGDEVLCDLEYVED
SAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLMALLESAKVGISEIVTAQKAALEN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaaacgatcgcaaggcggaccaagttcgcccaatcaaaattactcgaaactac
accgcttatgctgaaggctcagtgttagtggagttcggtaataccaaagtgttgtgtaat
gcgaccgtcgaagaatctgtaccacgctggctaaaaggccaaggtaaaggctgggtaact
gcagaatacggcatgctgccacgtgcaacacactctcgtactcgtcgcgaagcggcaaac
ggtaagcagggtggccgcactatggaaatccaacgccttatcgcgcgcagtctacgtgct
gttgtcgacttaaaagcgatgggcgagtttatgatcaccgttgactgtgacgtaattcaa
gcggatggcggcacaagaactgcttcaatcagtggagcaagtgttgcgatggcagatgcg
ttccagcacctaattgagagtggcaagctaaaagcaaacccaatgaaaggccacgtagcg
gcggtttctgttggtttgctaggtgatgaagtactgtgtgaccttgaatatgttgaagat
tcagccgctgatactgacatgaacgtggtcatgactgaagaaggcaagatgattgaaatc
cagggcactgcagaaggcgaaccgtttagtcacgagcaactgatggcactgctggagtcg
gcgaaagtcggcattagcgaaatcgtcacggcgcagaaggcggcgttagaaaattaa
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