Vollenhovia emeryi: 105559335
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Entry
105559335 CDS
T06016
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vem03009
]
105559335
Enzymes [BR:
vem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105559335
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
Other ribosome biogenesis factors
105559335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
105559335
NCBI-ProteinID:
XP_011862936
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MFSRFCNLCQRPAYVQFAQLQRCYRKGPKRRGNAKRVEAPRNTEDKTPIIVGKRKEFNFY
EGQTYPKYEPIPLISKGWHHYKSKGDYFSVYPLTSVKKESYGKSLKNEEGEEEEDACDSF
DQFGLDPQLIDVLKRYSITKPLKIQKMGIPKIINGANTVIAAETGCGKTLTYLLPMIDEV
LRWKKLAGHRYNAPLGLIVTPTRELAFQIGLEAKKICQYLDIRTKIITGGKTKKMMLDPP
MEMVDIVIASFGVISKLTTNKVYELDLVRHIVLDEADALFHDTFEEQLQVFLKRVPLGFA
QTVEDAKLPISAQFTLASATMPSRMSEVLDGIINVQSLEHVVSNKLHHILVPQKFIRMGS
SEKPAELLKYIKPKVASREQVIIFSNNNATCNWVSMFLDNSNVQTVPLNGDMPLYERQNK
YATFKSGKCRVLCTTNAGSRGLDTVAIRYVLNYEFPGATADYIHRCGRTGRVSSVEDCRV
DSFISTPKEIAVVQKIERAIRKMKPIPIFDINEGQKEDDTYLPFGSESEPETQQEFSIPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgttctccagattttgcaacttgtgccagagacccgcgtacgtccagttcgcgcaactg
caaagatgctacaggaaaggccccaagagaagaggtaacgccaagcgcgtcgaggcaccg
agaaatacagaagacaagacaccgataatcgtcggtaaacggaaagagttcaacttctac
gaggggcaaacgtatcccaagtacgagccgataccactgatcagcaaaggatggcatcac
tataaatctaaaggggactacttctctgtatatcctctcacgagcgtaaaaaaagagtcg
tacggcaagtcgttgaaaaatgaagagggagaagaagaagaagacgcatgcgactctttc
gatcagtttggattagatccacaattaatagacgtcttaaaaagatacagtataacgaaa
cctttgaagatacagaaaatggggataccaaagataataaacggcgccaataccgtcata
gcggcagaaaccggttgtgggaagacgttaacttacctcctacccatgatagatgaggtt
ttaaggtggaaaaagttagcagggcatcgatacaatgctcctcttggactgattgtgacg
cctactcgagaattggcatttcaaattgggctggaagcgaaaaagatatgccagtatctt
gatattcgtacaaaaattatcaccggtggaaaaacgaagaagatgatgctggatccaccc
atggagatggtcgatatcgttatagccagtttcggagttatcagcaagttaactacaaac
aaggtttatgaattggacctggtcaggcacattgtattggacgaagcggacgctttgttc
catgacacgtttgaggagcaactgcaagtattcttgaaaagggtgccgctcggtttcgcg
caaaccgtggaggatgccaagctaccaataagcgcccaattcacgttagcttccgcgacg
atgccttcgagaatgtcagaggttctggacggtatcataaatgtgcaatcgttggagcac
gtggtatcgaacaagttgcatcacattctcgtgccgcaaaaatttataagaatggggtca
agcgagaagccggccgaactcctgaaatacatcaaaccgaaagtggccagcagagagcaa
gtgattatcttcagcaacaacaacgccacttgcaattgggtcagtatgttcctggacaat
agcaacgtacaaacggtccccttgaacggcgacatgccgctgtatgagagacagaacaag
tacgccaccttcaaaagcggcaaatgccgagtgttatgcactacaaacgccggatcgagg
ggtttggatacggtggcgatacgttatgtgttgaactacgaatttccgggtgcgaccgcc
gattatatccacagatgcggtagaaccggaagagtcagtagcgttgaggactgcagagtg
gacagttttataagcactccgaaagaaattgctgtagtgcaaaaaatagagagggcgata
cgaaagatgaaaccaataccgatattcgatatcaacgaagggcagaaggaggacgatacc
tacctgccatttggatcggaaagtgaaccggaaacgcagcaagaatttagcataccattc
tga
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