Vollenhovia emeryi: 105565636
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Entry
105565636 CDS
T06016
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K06823
collagen type XVIII alpha
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vem04147
]
105565636
00535 Proteoglycans [BR:
vem00535
]
105565636
00536 Glycosaminoglycan binding proteins [BR:
vem00536
]
105565636
Exosome [BR:
vem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105565636
Proteoglycans [BR:
vem00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105565636
Glycosaminoglycan binding proteins [BR:
vem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105565636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
105565636
NCBI-ProteinID:
XP_011874388
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MPRSLLVIFAALCATCSRADFFSGKEVVYDLMVAPVSSTDDNNLYIDDGVDGFPAFGFRP
GSEVKQPYRLYLPEKLPAEFTLVATFKPTSFRTSYLFAVLNPFETVVQLGIRISDGPDSN
QNVSLVYTNSDEHSHSEEVAKFTVPKLTKKWSKIVIKVSTSDITFYLNCHEMARQRVTRI
PQELVFDTASTLYIAQAGPHIQERYDGLLQSLKLYAGHPPDLVKCTADFYFSASDEELAS
GDYDVNLFYGSGDTDLNKISRDTDEDKSEESNPPPFITPPPPNPDYKGPKGEKGDKGDKG
ESVRGPPGPPGPPGRDEDWQMKIPQGPPGQKGDPGTCTCNATALMSSFTMPKMIQGPKGE
PGVPGQEGKQGLMGLTGAAGPPGERGLQGSSGAKGDKGDIGIAGPEGPQGQKGEPGRDGI
PGEKGAQGPPGPPGKGEFSGYDPEGITMRPGLPGQKGEPGISGSPGPKGEAGIPGSKGIK
GEPGHKGAKGDHGKDGPRGIQGFKGEPGAPGAPGLPGAPGENGRPAEKGDKGDTGPEGKL
GPPGPPGPPGVGGPGGINVGDLGFGTKGGKGDAGARGYKGDKGTKGEKGDKGDGGPSGIP
GINGIQGPQGDKGEPGKDGVSGLAGIPGAKGERGERGPPGATTVANSGDYITIKGEKGAE
GKRGRRGRPGPPGPVGPPGKPGITGEIGLPGWMNTIKGRPGTPGIPGSIGPMGPKGEKGE
PGAPSPYGVSVGIKGDKGDDGFPGIPGQSGRDGQRGPPGPPGPPGAPSQGKYIPVPGPPG
PPGPPGPPGLSLIGQKGEPGIGRSHVFGERDYYPPRQGARSSLDELKALRELKQLKELKE
QLGVVTAATRGPLESTTKIVPGAVTFQNTEAMTKMSSVSPVGTLAYIIDEQALLVRVNNG
WQYIALGSLLPITTPAPPTTSPPPANPPFEASNLINQIPVKADGTGWYPRMLRMAALNEP
FTGDMHGIRGADYACYRQARRAGLRGTFRAFLSSRVQNVDSIVRLGDRDLPIVNIKGDVL
FNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAWPEKVAWHGSHKLGDRAMDTYCDAWH
SSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCIEVTSELVRRRRAADNRPDDDVEMSE
NDYMEYLEELMQY
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggtcgttactggtgatcttcgccgcgctatgcgcgacgtgcagtcgcgctgac
ttcttcagcgggaaggaagtggtatacgatttgatggtggcaccagtatcgtcgacggac
gataacaatctttacatagacgacggcgtggacggattcccggcatttggctttcgaccc
ggatccgaagtgaagcaaccctatagactgtacctcccggaaaagttgccagccgagttc
accctggtggccacgttcaagccgacctcctttcgaacgagctacctcttcgccgttctt
aatcccttcgaaaccgttgtccaattaggcattagaatttcggacggacccgactcaaac
caaaatgtctcgctggtctacacgaattcggacgagcattcgcattcggaggaggtggcg
aaatttaccgtgccaaagctcacgaagaaatggtcgaagatcgtcattaaagtttccacg
agcgacatcaccttctacctcaattgccacgagatggcccggcaaagggttaccaggatc
ccccaggaattagtattcgataccgccagcacgctgtacatcgcgcaagccggaccgcac
atccaggagcgatacgacggtttgctgcaatctttgaagttatacgccggccatcctccg
gaccttgtaaaatgcacagctgatttttacttttcagcttcagatgaagagctcgcttct
ggcgattatgatgtcaatttgttctacggttccggcgacactgatttaaataagatcagt
cgagatacggacgaagacaaaagtgaagagagtaacccgccgccattcatcacgcccccg
cctccgaatccagattataaaggtccgaaaggcgagaagggcgacaaaggggacaagggc
gagagcgtcaggggtcccccggggcctcctggcccgcctggccgcgacgaggattggcaa
atgaagataccacagggaccacctggtcagaagggagaccccggcacttgcacctgcaac
gccacggccttaatgtcttcctttacgatgccaaagatgatacaggggccgaagggtgag
ccaggagtgcccggacaggaaggcaagcagggcctgatgggcctcacgggtgcggcagga
ccgccaggggaaagaggactgcagggttcgtccggggctaaaggtgacaagggtgatatt
ggaatagcgggaccggaaggtcctcaaggtcagaagggcgagccgggtcgggatggaata
cccggtgaaaagggtgcgcaaggtccgccggggccgcccggaaaaggagaattttctggc
tatgacccggaaggtatcacaatgagaccaggacttccagggcaaaagggtgagccaggt
atttcgggaagtcctggacctaaaggcgaggctggaatacccgggtccaaaggtatcaaa
ggcgaacccgggcacaaaggtgccaagggcgatcacgggaaagacggtcctagaggaatt
cagggctttaagggtgaacctggcgcgcctggtgcacctggtttgccaggcgcacccggg
gaaaacgggcgaccggcggagaagggcgataaaggcgacacgggacctgaaggaaaactg
gggcctccaggaccacccggtccaccgggtgtgggcggacccggtggcattaacgtggga
gatctaggatttgggacaaaagggggcaagggcgatgctggagcgcgcgggtacaagggc
gataaaggcacgaagggcgagaagggcgataagggcgacggcgggccatctggtattccc
ggaataaacggtattcaagggcctcaaggagataaaggcgaaccgggtaaagacggagta
tcaggattagccggcatacctggcgctaaaggtgagagaggcgagagaggtcctcctgga
gccactaccgtcgccaattccggcgactatatcaccatcaaaggtgagaaaggcgccgaa
ggaaaacggggcaggagaggacggcctggaccgcccggtcctgtgggtcctcccgggaaa
ccgggaattacgggagaaattggtctgccaggatggatgaacacgataaagggtcgtcct
gggactcctggaattccgggaagtatcggaccaatgggacccaagggagaaaagggggag
cctggcgcaccaagtccttacggcgtttccgtcggtatcaaaggcgacaagggagacgac
ggtttccccgggattcctgggcagtcgggaagagacgggcagagaggaccgccaggacct
cccggacctcctggagcaccgtctcaaggaaaatatattccagtaccagggcctccaggt
cctcccggaccccccggcccgcccggcttgtctttaatcggacagaaaggagagcccggg
atcggtagaagccacgttttcggagaaagagattactatcctcccaggcaaggagccaga
agtagtctagacgaattgaaagctctgcgtgaactcaagcaactgaaagaactgaaagag
caattaggtgttgttactgccgctacgaggggacctttagaaagtacaacgaaaattgtg
ccaggagctgttacgttccaaaacacagaagccatgacaaaaatgtctagcgtaagtccg
gtcgggaccctggcttacatcatagacgagcaagcgttactagtcagagttaacaacggg
tggcaatacattgcactcggatcacttttgcctatcacaacgccagccccgccaacgaca
tctccaccgccggcgaatcctcctttcgaggcatccaacttaattaaccagatacccgtg
aaagccgacggtacagggtggtatccgcgaatgttaaggatggctgcgctgaatgagccg
ttcactggagatatgcatggtatacgaggagcagactacgcttgctatcgacaagcaagg
cgagcaggcttgagaggtaccttccgtgctttccttagctctcgagttcaaaacgtcgat
agcattgtcagattaggggatcgagatcttcccatagttaacataaagggcgacgtgcta
ttcaattcttggaaggagatgttcaatggaaatggggcgtacttctcccagaatcccaga
atctacagcttcaacgggaagaacatccttactgacttcgcatggcccgagaaagtcgcg
tggcacggctctcacaaactcggcgaccgtgcgatggacacttactgcgacgcctggcac
tcgagcagctcggatcgctacggattaggctcgccgttgaccggcggccggctgttggaa
caagtacgatactcgtgcgacaataaattcgcgctgctctgcatcgaggtgacgagcgag
ctggtgaggagacggcgggccgccgacaatcggccggacgacgacgtcgagatgtcggag
aacgactacatggagtacttggaggagctcatgcaatactga
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