Vibrio europaeus: IXK98_00680
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Entry
IXK98_00680 CDS
T07114
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
veu
Vibrio europaeus
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
veu03000
]
IXK98_00680
Transcription factors [BR:
veu03000
]
Prokaryotic type
Helix-turn-helix
Other families
IXK98_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_2
HTH_30
AAA_5
PAS_4
HTH_22
AAA
Mg_chelatase
MCM
HTH_7
HTH_23
DUF2089
HTH_50
HTH_29
TrmB
HTH_Tnp_ISL3
HTH_20
AAA_16
Phage_CP76
HTH_IclR
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QPG34273
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Position
2:complement(131697..133460)
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AA seq
587 aa
AA seq
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MELQTTQSGDWLASSWQRSSNAGLRQIKKPDDINVSNALLKERRYNAQGVIEAVKQCALP
LFNQVMSRSESRLILTDSEGVILASWGQEKFREKLMSIALESGTCWQEKWKGTNAIGTAL
FEQKAVSIIGEQHFIKQHRFISCSASPLFNHLGELVGILDITSEQAKHDVTTQLLVQNMV
QLVENYMLTQIPEGSLQINLAHNESVLKSGWQGIVIADENGHVVAHNQVATQLIDQASLV
GEHFENLLRQPLQNQFVFEKKSIGKSPSAKKWISAASDLHYGDDKIEQAWQQANKVMGCD
ISLLILGETGVGKGEFVKALHKHSSRRSEPLVTVNCGALPKDLMESELFGHAPGAFTGAN
KQGYSGRIRQADKGILFLDEIGEMPLEDQCRLLSVLQDKVVMPVGSAQSHHVDIQVIAAT
HQDLNLLVSQGKFRQDLYYRLNGLVVALPSLYERQDKLALIHAIHNKYQQNNQLLSSELT
SALMNYRWPGNLRELDNLVKVASLIASDTHEIGIEHLPAHFSQPLQGLQPNAKDDEEVSD
LKSTLNATLIDTYHTHNGNVSKVSRALGISRNTVYRKLKALGLMKAR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaactacagacaacacaatctggtgactggctcgcttcttcttggcaaagaagctca
aatgcaggtttaagacaaattaaaaaaccggatgacattaatgtttcaaacgctttactc
aaggagcgacgttacaacgcgcaaggagtcattgaagcggtcaaacaatgtgcattgcct
ctgttcaatcaagttatgtctcgtagcgaaagccgcttgatattaactgactctgaaggt
gtgatacttgccagttgggggcaggagaaatttcgtgagaaattgatgtcaatcgccctc
gaatcagggacgtgttggcaagaaaaatggaaaggcactaatgcgatcggaaccgctctt
tttgaacaaaaagcggtttccattatcggtgaacagcactttatcaaacagcacagattt
atcagttgttctgccagtcctttgttcaaccatctaggagaattggttggaattcttgat
attacgagcgaacaagccaaacatgatgtgacaacgcaacttttggtgcaaaacatggtt
cagttagtggaaaactacatgttgactcaaattccagaaggttcattgcaaattaacttg
gcccataacgaatcggttttaaaaagcggttggcaagggatagttatcgctgatgagaat
ggtcatgttgtggcccataaccaagtcgcgacccaattaattgatcaggcctctttggtg
ggagagcatttcgagaatctactcagacaaccgctacaaaatcagtttgtttttgaaaag
aaaagcattggtaaatcaccttccgccaagaaatggattagcgcagccagcgacttgcat
tatggagacgataagatagagcaggcttggcaacaggcaaacaaggtcatgggttgcgat
attagtctgttgatcttaggtgaaaccggtgtggggaaaggtgagtttgttaaagcacta
cacaagcacagcagtcgtcgcagtgaacccttggttactgtgaactgtggtgcattaccg
aaagatttaatggagtcggaattgtttggccatgccccaggtgcatttactggtgctaat
aagcaaggctacagtgggcgcataagacaagctgataaggggatcttgttccttgacgag
ataggggagatgccgcttgaggatcaatgtcgcttgttatcggtattgcaagataaagtg
gtcatgccggtgggatctgcccaatctcaccatgttgatattcaggttatcgcagcaacg
catcaagatctaaatcttttggtttctcaaggtaagttcaggcaagatttatattatcga
ctcaatggattggtggtggcgttaccgtctttgtatgaacgccaagataagctcgctttg
attcacgctattcacaacaagtatcagcagaataatcaattgctttcgagtgaattgaca
agcgcactgatgaattatcgttggccaggtaatctccgagaactcgacaacctagtaaaa
gtcgcgagcttaattgccagtgatacccacgaaataggcatagaacatcttcccgcacac
ttttcacagcctttgcaaggtttgcagcctaatgcaaaagatgatgaagaggtatccgat
ctaaagtcgacgcttaacgccactttgatcgatacctatcacactcacaatggcaatgtc
agcaaagtctcccgcgcgcttggcattagccgtaatacggtatatcgcaaacttaaagcc
ttagggctaatgaaagctagatga
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