Vibrio antiquarius: VEA_002619
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Entry
VEA_002619 CDS
T01107
Name
(GenBank) C-di-GMP phosphodiesterase A-related protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vex
Vibrio antiquarius
Pathway
vex05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VEA_002619
Enzymes [BR:
vex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VEA_002619
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ACY50781
LinkDB
All DBs
Position
1:complement(1129292..1131331)
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AA seq
679 aa
AA seq
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MPSQQLKHWFATLTSNSPFFFAILDKKHNYRMVSDRYCDIAGLSHEEIIGLNDCQVLGEQ
FYKKLAPYYQRAFKGTHVEAEITLDETDLETSLHFSLSPVFEGNEIRFVVFHAVDTSEKQ
ILVRSLEESESKFAKLTQLLPDGLLLIEDDIIISANPASARLLGLNSPHELLGEELSRLF
IDENSKKVFSHRLSALISDKPFVCLTSARCGFERKVQLHADSTAILGSESQIILIQDADD
TPKNLSSASNEDIHIDSLTKLYNRFGFTKRLEQLIKKQTPLLVFYLDIDNFKNINDSLGH
HIGDKVIQEVSARLKRLLPNQAIIGHLGGDEFGVILPEPENTRMAEILSDRIISLINQPF
DLHHFSKRLACSIGSVRYPEDGQDARILLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGSFIPVAER
AGLIEHLGRVVMRDVFNTVKRWKQQGILPGRVAINLSPEQFGNPQLIDFMEKLLRTTELD
PSCITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFINDIDTLPKQVTVIENIINLGKSLDLTVVAEGVETHQQATLLSNLQCNAIQGFHFYR
PQPKHEIEELFVQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccagcaattaaaacattggtttgccacgctaacctcaaatagccctttcttc
tttgccattcttgataaaaaacacaattatcgaatggtaagtgaccgttactgcgatatc
gcaggtttaagtcatgaggaaatcatcggcttaaacgattgccaggtactgggtgagcag
ttttataaaaagctggccccttactatcagcgtgcattcaaaggaacgcatgtcgaagcc
gaaatcaccctcgatgaaaccgaccttgaaaccagcctgcactttagtctgtcaccggtt
tttgaaggtaacgaaattcgctttgtcgtttttcacgctgtggatacttcagaaaagcag
atcctcgtacgctccttagaggagtccgaaagtaaatttgcgaaattgacacaactactg
cctgacggtctgctgcttatcgaagatgacattatcatctctgccaaccctgcatcagca
cgccttctgggactgaactctccccatgagttgctaggcgaggagctcagccgtctattc
atcgatgaaaacagcaagaaagtgtttagtcatcgtttgagtgcattaatttctgacaag
ccgtttgtttgcttaaccagcgcgagatgtggctttgaacgaaaagttcagttacacgca
gattctacggcgatattaggcagcgagtctcaaatcatcttgatccaagacgctgacgat
acacccaagaatttgtcttctgcatcgaatgaagacatacacattgattcgctcaccaaa
ctctacaaccgctttggcttcaccaaacgtttggaacagctgatcaaaaagcaaacaccg
cttctggtgttctatttggatatcgataacttcaaaaatattaatgactcacttggtcac
cacattggcgataaagtgattcaagaggtatcggcccgtcttaaacgattattgccaaat
caagcgattattggtcatttgggtggcgatgagtttggcgtcattctgccagaaccagaa
aatacccgcatggctgaaattttgtcagatcgcattatctcgttgatcaaccagcctttc
gacttgcaccacttcagtaaacgccttgcgtgctcaattggtagcgttcgttaccctgaa
gacgggcaagatgcgcgaatcctgctacaaaatgctgatactgcgatgtatgaagccaaa
gatcgtggccgaaatcgcctgatcaaatttaacgaccagatgaacaaagaagcgcgcatg
cgtttgtggcttgaaatcgaactgcaaaaagcattgcagcagaacggtttggaggtgtgg
tatcaaccaaaggttaacgcgcgtgacttcagcattaatggtgccgaagcgctcgttcgt
tggaaacaccctgtcgaaggttacattagcccaggttcattcattcctgtcgccgagcgt
gcagggttaatcgaacatcttggacgcgtcgtgatgcgtgatgttttcaatacggtaaaa
cgttggaaacaacaaggcatactgccaggtcgtgtcgctatcaacctctctcccgagcaa
tttggtaacccacagctgatcgactttatggaaaagttgcttcgcactaccgagcttgat
ccaagctgcattaccttcgagctaaccgaaagtgccgtgatgagtgatagcgaacataca
ctgcaaatgctgaatgcgattaagaaactgggcttcgccctctctatcgatgactttggt
actggttactcttccctttcctacttagcgcgcttccctatcgacgagctgaaaatcgac
cgcgcgtttattaacgatatcgacacgctacccaaacaggtcactgtgattgaaaacatc
attaatctgggtaagtcactcgacttgacggtcgttgccgagggggtggaaacccaccag
caagctactttgctctctaaccttcaatgtaatgcgattcaaggattccatttttatcgc
ccacagccaaaacatgaaattgaagagctgtttgtacagaatcgtcgtcacaagaactaa
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