Vescimonas fastidiosa: MM35RIKEN_01000
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Entry
MM35RIKEN_01000 CDS
T07633
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa00550
Peptidoglycan biosynthesis
vfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM35RIKEN_01000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
MM35RIKEN_01000
Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MM35RIKEN_01000
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Paralog
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Sugar-bind
Motif
Other DBs
NCBI-ProteinID:
BCK77908
UniProt:
A0A810PM85
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Position
84740..86992
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AA seq
750 aa
AA seq
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MTPTNGEMNRKSEKVRRANRTIQNRTLILMAFLGVGVFIALFFKLFSLQILRHDELEAKA
LDQQTRSTVVTATRGTIYDRNGNIMAISATAETVFLSPLEMNRALNDKDAPVTWTKDSVA
QRLSEILQINKEGILKKMERTDSQYEVLKMRIEEEVADQIRSYINDEGVVGVYMATDAKR
YYPYSTLASQVIGFVGTDNTGLYGLEARYNSTLEGQTGLVVSTKDPAGNDMLYGYEQYYK
AKNGSDIVLTLDATVQYYVEKAINEMVTATEAANGATGIVMDVETGAVLAMASSPGYDLN
DPSSIYDAAVAKLVTEKKLDLADAQLRQWRNKAINDTYEPGSTFKVLTLAAALEEGVIDK
DTTFDCSGSIHVLDATIHCSNRGGHGHQTLEQTAGNSCNPAFITYGLRLGTEKFYDYMKN
FGIINGSGIDLDGEALGIFAPQETSSELDLACYAFGQNFNTTPIALISAQAACINGGYLH
TPYVVERVVDSDGNVLSSHDTTPVRQVVSEETSALVRQCLEYVVSSGTGRNGQVKGYRIG
GKTGTADKGKTGDTILSFMCFAPADKPKYIMLLTLDTPAGEGRGGGGTVAPYASQIMSEI
LPYLGVEPSYSAEELLGSDTTVNYVIGMSVSDAEAKLKARGFSVKVVGDGDTVTDQTPEG
GTVIPGKSRVILYAGSEKPSTLCTVPNLVGMSPSEANVAVSSAGLILRFTGTTDSGSDSI
RVINQSEAAGSQVEAGTVISAQLRDGGVTD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacccccaccaacggcgaaatgaaccgcaaaagtgaaaaggtccgtcgggccaaccgc
accatccaaaaccgcaccctgatcctcatggcctttttgggtgtaggtgtgttcattgcg
ctctttttcaagctcttctccctgcaaattctgcgccacgacgagctggaggccaaggcc
ctggaccagcagacccgcagcaccgtggtcaccgccacccggggcaccatttacgaccgc
aacggcaatattatggccatctccgccacagcggaaacggtttttctctcccctctggaa
atgaatcgcgccctgaacgacaaggatgcccccgtcacctggaccaaggacagcgtggcc
caaaggctctcggagatcctgcagatcaacaaggagggcatcctcaagaaaatggagcgc
accgactcccagtacgaggtgctgaaaatgcgcatagaggaggaggtagccgaccaaatt
cgcagctacatcaatgatgagggcgtggtgggagtctacatggccaccgatgccaagcgc
tactatccctattccaccctggcctctcaggtcattggcttcgtaggcacagacaacacc
ggcctctacggcctggaggcccggtataacagcaccctggaggggcaaacgggcctggtg
gtgtctaccaaggacccggcgggcaacgatatgctctatggctatgagcagtattataag
gcgaaaaacggcagcgacatcgtcctgaccctggacgccaccgttcagtattatgtggaa
aaggccattaatgagatggtcaccgccaccgaggccgccaacggcgccacgggcattgtc
atggatgtggagaccggcgcggttttggccatggcctccagccccggctacgacctgaat
gacccttcctccatttatgatgccgccgtcgccaagctggtgacggagaagaagctggac
ctggcggacgcccagctgcgccagtggcgcaacaaggccatcaacgatacctatgagccc
ggctccaccttcaaggtcttgaccctggcggcggctctggaggagggggttatcgacaag
gataccaccttcgactgctccggctccatccatgtgctggacgccaccatccactgcagc
aaccggggcggccacggccaccagaccctggagcaaacggcgggtaactcctgcaacccc
gccttcatcacctacggcctgcgcctgggcacggagaagttctatgattatatgaagaac
ttcggcatcataaacggcagcggcatcgacttagacggcgaggccctgggcatcttcgcc
ccccaggagacctcctcggagctggacctggcctgctacgccttcgggcagaacttcaat
accacccccattgcccttatttccgcccaggccgcctgcatcaacggcggctacctccac
actccctatgtggtggagcgggtggtggacagcgacggcaatgttctctccagccatgat
accaccccggtgcgccaggtggtcagcgaggagacctccgccctggtgcgtcagtgcctg
gagtatgtggtttcctccggcacgggccgcaacggtcaggtgaagggctaccgcatcggc
ggcaaaaccggcacggcggataaggggaaaacaggcgacaccattttgtccttcatgtgc
tttgccccggcggataaacccaagtatatcatgctcctgaccctggatacccctgccggg
gagggccgtggcggcggcggcaccgtagccccctatgccagccagatcatgtcggagatt
cttccttatttgggcgtggagccctcctattccgcggaggagctgctgggctccgacacc
acggtgaactatgtgatcggtatgtccgtttcggacgccgaggccaagctgaaggcccgg
ggcttctctgtgaaggtggtgggcgacggcgataccgtcaccgaccagacccccgagggc
ggcacggtgatccccggcaagtcccgggtgatcctctatgccgggtcggaaaagcccagt
accctttgcaccgtgccgaacctggtgggcatgtcccccagtgaggccaatgttgcggtg
agcagcgcgggactgatcctgcgcttcaccggtaccacagacagcggctcggacagcatc
cgggtcatcaatcagtcggaggccgcaggctcccaggtggaggcggggacagtgatttcc
gcccagctccgggacggcggcgtgacggactga
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