Aliivibrio fischeri ES114: VF_0613
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Entry
VF_0613 CDS
T00236
Symbol
truC
Name
(GenBank) tRNA pseudouridine synthase
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_0613 (truC)
Enzymes [BR:
vfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
VF_0613 (truC)
Transfer RNA biogenesis [BR:
vfi03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
VF_0613 (truC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AAW85108
UniProt:
Q5E788
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All DBs
Position
I:671351..672130
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AA seq
259 aa
AA seq
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MNTEEMTAVNDELLEEQAEPIELEIVYRDEHLIAINKPAGMLVHRSWLDKHETVFAMQTL
RDQIGQHVFPLHRLDRPTSGILFFALSSEIAAQVSPLFASREIKKTYHAIVRGWIEEANT
LDYPLKKELDKIADKKASQEVEAKEAITEYKPLAKVELPYSTGKFPTTRYCLMELKPHTG
RKHQLRRHMAHLRHPIVGDTSHGDGKHNRLFKEKLDSHRLLLHASELNFTHPITGEDIVI
KADFDETWKKLFTEFGWDF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacagaagaaatgacagctgtgaatgatgagttattagaagaacaagctgagcca
atagagcttgagattgtttatcgtgatgaacatttaattgcgattaataaacctgcagga
atgttagtgcaccgttcatggcttgataaacacgaaacggtatttgcgatgcaaacatta
cgtgatcaaattggtcagcatgtgtttccattacatcgtttagacagaccaacatcaggg
atattattctttgctttatcaagcgagattgctgcacaagtatctccacttttcgcaagc
agagaaataaagaaaacctatcatgcgattgttcgcggatggattgaagaggcgaacacg
cttgattatccattgaaaaaagaactcgataaaattgcagacaaaaaggcatcacaagaa
gtcgaagctaaagaagcgattacagagtacaaaccgttagctaaagtggagttaccttat
tcaacaggtaagtttccaaccacgcggtattgtttgatggagttaaaaccacatactggt
agaaagcatcaacttcgtcgtcatatggcacatttacgtcacccaattgttggtgataca
agtcacggcgatggaaagcataatcgtttatttaaagaaaaattggatagccaccgtttg
ttacttcacgcatctgaattgaattttactcatccaataacgggggaggatatcgtgatt
aaagcggactttgatgagacttggaaaaaactatttactgagtttggttgggatttttga
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