Aliivibrio fischeri ES114: VF_A0570
Help
Entry
VF_A0570 CDS
T00236
Gene name
ddl
Definition
(RefSeq) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00473
D-Alanine metabolism
vfi00550
Peptidoglycan biosynthesis
vfi01100
Metabolic pathways
vfi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00473 D-Alanine metabolism
VF_A0570 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VF_A0570 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VF_A0570 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
VF_A0570 (ddl)
Enzymes [BR:
vfi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VF_A0570 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
Precursor biosynthesis
Amino acid ligase
VF_A0570 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
3280446
NCBI-ProteinID:
YP_206528
UniProt:
Q5E006
LinkDB
All DBs
Position
II:655406..656398
Genome map
AA seq
330 aa
AA seq
DB search
MTHILLLCGGGGTEHEVSLVSSKYISQQLSELDAFEITHLEIKDEGWFHIESGLKYELRS
DKTLLSGETVSSPVDYVVPCIHGYPGETGDIQSMLDMLSIPYLGCDAESSTNSFNKITSK
LWYDALGIPNTPYLFLTENNEETHQSALAAFKQWGGLFVKAACQGSSVGCYKVTSEAELS
KAINDAFGYSQQVLVEKAVKPRELEVAAYEIDGQLFTTAPGEVTAPDGAFYTYDEKYGSG
SHSTTSLDAQNLTEEQVKLIDQYSRKVFTQMKLKDLSRIDFFLTDDNEIYLNEVNTFPGM
TPISMFPKLLEHNGDCFKTFLQKAVLNAIK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgactcatatccttttactttgtggcggtggcggcactgaacacgaagtttcattagtt
tcttcaaaatatatctctcaacaactttctgaacttgatgcatttgaaattacgcatctt
gagattaaagatgaaggttggtttcatattgaatctggcttgaagtacgaactacgttca
gacaaaacattattaagcggtgagacagttagctctccagtagattacgttgttccgtgt
attcatggttaccctggtgaaaccggcgatattcaatctatgctagatatgcttagtatt
ccttatttaggatgtgacgctgaatcaagtacaaatagcttcaataagatcacatctaaa
ctttggtatgatgcgcttggtatcccaaatacaccgtacttattcttaactgagaataat
gaagaaactcatcagtcagcattagcggcatttaagcaatggggcggactatttgtaaaa
gctgcatgtcaggggtcttcagttggttgttacaaggtaacgtcagaagctgaattatca
aaagcaattaatgatgcatttggttattcacaacaagtacttgttgaaaaagcagttaaa
cctcgtgagcttgaagttgcagcatacgaaatcgatggtcaactatttacgacggctcca
ggtgaagtaacggcaccagacggtgctttctatacttatgatgaaaaatacggtagcggt
agccattcaacgacatctttggatgcacagaatcttactgaagagcaagttaagctgatc
gatcaatacagtcgtaaagtgttcactcaaatgaagcttaaagatctttctcgtattgat
ttcttcctaacggatgataatgaaatttacttaaatgaagtgaatacatttccaggaatg
acgccaatttctatgttccctaaattattagaacataatggcgattgtttcaaaaccttc
ttacaaaaagcagtacttaacgcgattaagtaa
DBGET
integrated database retrieval system
