Vibrio fluvialis: AL536_16070
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Entry
AL536_16070 CDS
T04379
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vfl
Vibrio fluvialis
Pathway
vfl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL536_16070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfl03000
]
AL536_16070
Transcription factors [BR:
vfl03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
AL536_16070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
HTH_23
DUF2089
Sigma70_r4
HTH_40
HTH_24
HTH_10
TnsD
HTH_36
HTH_28
HTH_20
FaeA
HTH_11
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AMF96172
UniProt:
A0A0X8LQB9
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All DBs
Position
2:1821175..1821795
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AA seq
206 aa
AA seq
DB search
MLKETLGRNLPLSVELQRFSQLSIEKSTCAKYIFIDFAHITDEFENNYYNIKYQIGLHAK
EILINCPRDISVAYLFKWPNLYGVFYVDDYIDKILQGTHKIMQGEMWLSRQLSQDYILHF
RSNIPVLSSRMLGAVLTKREHEFVKLLVKGKTNPEIAEHFGVSLNTVKSHLHNLFKKINA
KNRVQAVIWAKDSLGLDTKPNDIKAE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagaaactctggggcgaaaccttcctctgtcggttgaattacaacgtttcagt
cagttgagcatcgagaaaagtacctgcgcaaaatacatttttattgattttgcccacatt
acagatgagttcgagaacaactactacaacatcaaatatcagataggtttacacgccaaa
gaaatactgattaactgcccgagagacatcagcgtggcgtacttatttaagtggcccaat
ttgtatggggtgttttatgtcgatgactatattgacaagattttgcaaggcacccataaa
atcatgcaaggtgagatgtggctgtccaggcaactctctcaggactatatcctacatttt
cgcagcaacattcctgtgctctccagccgaatgctaggtgccgtgctgaccaagcgtgag
catgagttcgttaaactattagtgaaaggaaaaacgaaccctgaaatcgctgagcatttt
ggcgtaagtctgaataccgtaaaatcccatctgcataatctcttcaaaaaaatcaacgcg
aagaaccgggttcaggccgtcatttgggctaaagatagtctgggtttagacacaaaacca
aacgatataaaagccgaataa
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