Vibrio gazogenes: BSQ33_03820
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Entry
BSQ33_03820 CDS
T04933
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vga
Vibrio gazogenes
Pathway
vga02020
Two-component system
vga02040
Flagellar assembly
vga05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSQ33_03820
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
BSQ33_03820
09142 Cell motility
02040 Flagellar assembly
BSQ33_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vga03021
]
BSQ33_03820
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vga02035
]
BSQ33_03820
Transcription machinery [BR:
vga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSQ33_03820
Bacterial motility proteins [BR:
vga02035
]
Flagellar system
Flagellar assembly proteins
Stator
BSQ33_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
UPF0122
HTH_10
Rv2175c_wHTH
MarR_2
UPF0175
Phage_terminase
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASA54934
UniProt:
A0A1Z2SCM5
LinkDB
All DBs
Position
1:complement(847930..848664)
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYDQYGNLNNQQAFLEKYSVLVKRIAHHLIGRLPPSVQVEDLIQAGMIGLLEAQK
NYDNSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKYNREISQAISVLEGELNREPTD
TEVAKYLGMSLDQYHGVITDINSSRIVGIEDLGVSDDAISPFDSDDDNSPFKGVADESFR
KALVESIKSLPEREALVLSLYYDEELNLKEIGEVLGVSESRVSQILSQTMQRLRTKLRSW
TQND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggcgctgacgtacgatcaatatggaaatctcaataatcagcaggcttttctg
gaaaagtattctgtattggttaagcgtatcgcacaccacttgatcgggcggttaccgccg
agtgttcaggtcgaagatttgattcaagcgggaatgatcggactactcgaagcgcaaaaa
aactatgataatagtaaaggtgccagttttgaaacttatgcggggatccgtatccgtggc
gcaatgttggatgatattcgtcgcggagactgggttcctcgctctgtccataaatataat
cgtgagatcagccaagcaatttcggtacttgaaggtgaattaaatcgtgaaccgaccgat
acagaagttgctaagtatctgggaatgtcgttagatcaatatcatggcgtcattaccgat
ataaatagttctcggattgttggcatcgaagatttaggtgtttctgatgatgcaatatca
ccttttgatagtgatgatgataattcaccatttaaaggtgttgctgacgaatcatttcgt
aaagcattggttgaatcaataaaatcgcttcctgaacgtgaagctttagtactttcgctc
tattatgatgaagagctaaacttaaaagaaattggtgaagtgcttggtgtgagtgagtct
cgcgtaagccaaatattaagccaaaccatgcagcgtttaagaacaaagctgcgttcttgg
acacaaaatgactaa
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integrated database retrieval system
