Variibacter gotjawalensis: GJW-30_1_01993
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Entry
GJW-30_1_01993 CDS
T05320
Symbol
hcaR_2
Name
(GenBank) Hca operon transcriptional activator
Organism
vgo
Variibacter gotjawalensis
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_20
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BAT59460
UniProt:
A0A0S3PUA9
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Position
2052533..2053411
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AA seq
292 aa
AA seq
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MNLRSLRCFIAVADELNFSRAAKRLNMSQPPLTQHIKNLEEELGAVLFHRTKRTVQISEV
GAALLDEARRLLAHADGLPHLAQRAKGGGTGLLRAGFVASAVFTRARSLYTKLSFGIPGI
VTMWQEMNSAEQMAALREGKLDIGFAYLAAESEDLKSKVVFRDPIVVTVPEHHRFAKRRS
IRLTELRDDDFVLPVRHLSPRFYDRVISACHEAGLSPTIPHQPRHMLSILSLVSMGAGVS
FLPRSLAKAGFPGVAFLNIAGTTPDIELSVVWHPDNISPALRRALQVIVPLC
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgagatcgctccgctgtttcattgctgtggccgacgagttgaacttcagccgt
gccgccaagcgattgaacatgtcgcagccgccgttgacgcagcacatcaaaaacctcgaa
gaagaacttggcgctgtcttgttccatcgaacgaaacgtaccgtgcagatatcagaggtc
ggagcagcattgctcgacgaagcgcggcgtttgctcgcgcatgcggacgggctgccgcat
cttgcccagcgtgcaaaaggaggtggaacgggtttgcttcgcgccggattcgtggcttcg
gccgtcttcacgcgagcgcgatcgctctacaccaagctttcgttcggcataccaggcatc
gtgacgatgtggcaggagatgaactcggcggaacagatggccgcgctacgcgaaggcaag
ctcgatatcggtttcgcctatctcgccgccgaaagcgaagacctaaaatcgaaagtggtc
tttcgagatccgatcgtcgtaaccgtgccggagcatcaccggttcgctaagcgccgcagt
attcgactaaccgaactgcgcgacgacgatttcgtccttccagttcgccatttgtcgcca
cgcttctacgatcgcgtcatctccgcctgccacgaagcgggcctgagcccgacgatccca
caccagccgcgacatatgctgtcgatactcagtctggtgtcgatgggagcaggagtttcg
tttctaccgcgatcgctagccaaggcaggttttcccggcgtcgcatttttgaacatcgcg
ggaacgacgccggacatcgagctttccgtcgtttggcatccggacaacatctcgccggct
ttgcggcgtgctcttcaggtcattgtgccgctgtgctga
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