Variibacter gotjawalensis: GJW-30_1_02043
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Entry
GJW-30_1_02043 CDS
T05320
Symbol
gmr_4
Name
(GenBank) cyclic di-GMP phosphodiesterase Gmr
Organism
vgo
Variibacter gotjawalensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
MHYT
Motif
Other DBs
NCBI-ProteinID:
BAT59510
UniProt:
A0A0S3PU67
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Position
complement(2097777..2099882)
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AA seq
701 aa
AA seq
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MCGDISGLWLSQLNASGAAILRVISCLVTQHNLWLVALAASMCCLGSAITFGLFARARER
SGLEKCGWTFLTAVAAGSSIWCTHFIAMLGYNIDAPVSLDPIYTTFSLLVAIVGCGVGFS
IGAFSRQRFAPELSGCILGVSVSVMHYTGMQAYRVTGVVEWHHNYVVCSILLASLFSALA
MREAKRLSNQYAQLAAAALFVFAIVSLHFTGMAAVEVTPLADFDNRNNREAFTAVAVAVA
SVGLIVAGTGVASYLIDNRASAQTVGRLRRLALHDALTGLPNRVHFSDHLSAELNLAERK
AHGLAVIVIDLNNFKEVNDLRGHGAGDHTLQVIGQRFADLTGLGEFVARVGGDEFAATTR
YEEIAEVNAFVDRLNAALNQPLAFDGFEAATGGAFGIALYGQDGLDAEQLVSNADLAMYR
AKNRSGVTACFYRKEMDEAARERKSIRADLQYAIARGELKLHYQVQTSALTDEVTGYEAL
LRWTHRTRGLIPPDIFIPIAEESGAIVEIGDWVLRTACKTAVQWGRDKIAVNVSGVQIAR
ADFAESVHSILYETGLPPNRLELEITETALIADKVRALHTIRQIHALGVSIAIDDFGTGY
SSMQTLRTFPFSKIKLDRSFTHGLDREPAAKAILHAVLALGKSLGITVLAEGVETLAQLD
ILRHEGCDEVQGYLLGRPEPRESALAANISVAQLSRLAGAA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggagatatctctgggttgtggttgagccagctcaacgcatcaggggctgctatt
ttgcgtgtgatctcgtgcttggtaacccagcataatctctggctggtggcactggctgct
tccatgtgttgtttaggtagcgccatcacgttcgggctcttcgctcgtgcgcgcgagcgg
agcggcttagagaaatgcggttggacgtttctcaccgctgttgcagccggctcttcgatt
tggtgcacgcacttcattgcgatgctgggatacaacatcgacgcacccgtaagcctcgac
ccaatatacacgacattctcgctgctcgttgcgatcgtggggtgtggcgtgggattttcc
atcggcgctttcagccgacagcgtttcgcgcccgaactgagcgggtgcattctcggcgtc
agcgtttcggtcatgcattacacgggcatgcaagcttatcgtgtcacgggcgtcgtagaa
tggcatcataactacgttgtatgctccattctacttgcttcgctcttttcggctctggca
atgcgcgaagccaaacgcttgtctaatcaatatgcgcagttagccgccgctgcgctgttc
gtgttcgcaatcgttagtctgcacttcacaggaatggccgccgtcgaagtcacgccgctg
gctgacttcgataaccgcaacaatcgtgaagcattcaccgccgtcgctgtggctgttgct
agcgtcgggctgattgttgccggcacaggcgtggcgagctacctcatcgacaatcgagct
agcgcgcagaccgttggacgtctgcgccggttggcacttcacgatgctctaaccggcctg
cctaatcgggtccacttcagcgaccatctaagtgctgagttgaacctggccgaaaggaaa
gctcatgggcttgccgtaatcgtcatcgatctgaacaatttcaaagaggtgaacgatttg
cgtggccatggtgccggcgaccatacacttcaagtcatcggtcaacggttcgccgacctg
accggactcggggagtttgtcgcgcgcgtaggtggcgacgaatttgctgctacaacgcgt
tacgaagaaatcgctgaagtgaacgccttcgtcgatcgactcaacgccgcattgaatcag
ccgctcgcttttgacggcttcgaagctgcaaccggtggcgcatttgggatcgcgctgtat
ggtcaagatgggttggacgcagagcaactggtatcaaatgccgatctcgctatgtatcgc
gcgaagaaccggtccggtgtgacggcctgcttctatcgaaaagagatggatgaggccgcg
cgagagcgcaaatcgatacgcgctgatttgcagtatgcgatcgctcgcggtgagctgaag
ttgcactaccaggtacaaacgtcggcattgaccgatgaagttactggttacgaagcgctt
ctccgctggacccaccgcacgcgcggcctgatcccgcctgacatattcatcccaatagca
gaggaaagcggcgcgattgtcgagatcggtgattgggttctgcggacggcctgcaaaact
gcagtgcagtggggccgagacaaaattgccgtgaatgtttctggtgttcagattgcgcgc
gctgactttgccgaatctgtccattcgattctttacgaaacaggtctaccgccgaaccga
ctggaattggaaattactgaaaccgcgctcatcgcagacaaggtcagagcgctccatact
attcggcaaatccatgcccttggagtatccatcgcgatcgacgatttcggcacaggctat
tcttccatgcaaacactgcgcacattccctttcagcaagatcaagctcgatcgatccttt
acacatggtctcgatcgcgaacccgctgcgaaagcaattctgcacgcggtactcgcgctg
ggcaaaagcttaggcatcacggtgctcgctgaaggcgtcgagacactcgctcagcttgat
attcttcgacatgaaggctgcgatgaagtgcagggctatctactcgggaggccagaacca
agagagagtgcgttggcagctaacatttccgtagcgcagttgtcacggttggctggcgct
gcgtaa
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