Vibrio campbellii ATCC BAA-1116: VIBHAR_00393
Help
Entry
VIBHAR_00393 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vha03009
]
VIBHAR_00393
Enzymes [BR:
vha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
VIBHAR_00393
Ribosome biogenesis [BR:
vha03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VIBHAR_00393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_5
Cons_hypoth95
Methyltransf_11
Methyltransf_15
Methyltr_RsmF_N
Met_10
MTS
Methyltransf_24
TrkA_N
BMT5-like
Motif
Other DBs
NCBI-ProteinID:
ABU69408
UniProt:
A7N123
LinkDB
All DBs
Position
I:375549..376832
Genome browser
AA seq
427 aa
AA seq
DB search
MNVRAAAANVLYLVVDKGHSLSSALPAAQQNVRPRDHALLQEICYGALRYLPRLEMIANQ
LMDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVGETVEGTKELKGPRLRGLINAVLRN
YQRNQEELDQMAVSNNAGKYGHPSWLLKLLQEAYPEQWESIVEANNQKAPMWLRVNHQHH
TRDEYLALLKNENIDSTPHTQAMDALKLAAPCDVMKLPGFEKGWVSVQDAAAQLSINYLE
PKDGELILDCCAAPGGKTAHILERTSGSEVVAIDCDDTRLKRVHENLKRLNLQAKVVCGD
ARHPQEWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQSEIFDAMWTQ
LKPGGTMVYATCSITPQENVEQVKAFLARTANTQLVDSDPKQPGRQILPGEEDMDGFYYA
VLTKKHA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgctgcggctgccaacgtcttgtatcttgtcgtcgacaagggccactca
ctttcaagcgctcttccagcggctcaacaaaacgtacgaccacgtgaccacgctcttctg
caagagatctgttacggcgctctacgttacctccctcgcctagaaatgattgcaaaccag
ttgatggataagccgttaaaaggcaaacaacgcgttttccatcacctgattttggttggt
atttatcagctaagcttcatgcgtattcctgcgcacgctgcagtcggtgaaacggttgaa
ggcacgaaagagctgaaaggccctcgcttgcgtggtcttatcaacgctgtattgcgtaac
taccagcgcaaccaagaagaactagaccaaatggcggtcagcaacaatgcgggcaagtat
ggccacccaagctggttactaaagctgctgcaagaagcttacccagagcagtgggaaagc
attgttgaagccaacaaccagaaagcgccaatgtggttgcgtgtaaaccaccagcaccac
actcgtgatgaataccttgcgctactcaaaaatgaaaacattgatagcacgccacacaca
caagcaatggacgccctaaaattggcggcgccatgcgatgtgatgaaactgccgggcttt
gaaaaaggttgggtatcggtgcaagatgcggcagcgcagctgtcgattaactatcttgaa
ccaaaagatggcgagctgatcctagactgctgtgcagcacctggtggtaagacggcacac
attcttgagcgtacgtctggcagcgaagtggttgccattgactgcgacgacacacgtctt
aaacgtgtgcacgaaaacctgaaacgtctcaaccttcaggcaaaagtggtttgcggcgat
gcacgtcatcctcaagaatggtggcaaggcgaacaatttgatcgcattttgctggacgca
ccatgttctgcaacgggcgtaattcgtcgtcacccagacatcaaatggctacgtcgtgct
gatgatattgccgcacttgcggaactacagagcgaaatttttgatgcaatgtggacgcaa
ctgaaacctggcggcaccatggtttacgcaacttgttcaatcacaccacaagaaaacgtg
gaacaagtaaaagcgttcttagcgcgcactgcaaacacgcaattagtggactccgatcca
aagcaacctggtcgtcagattctgccaggtgaagaagatatggatggtttctactacgca
gtgctaacaaaaaaacacgcgtaa
DBGET
integrated database retrieval system