Vibrio campbellii ATCC BAA-1116: VIBHAR_05785
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Entry
VIBHAR_05785 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00470
D-Amino acid metabolism
vha00550
Peptidoglycan biosynthesis
vha01100
Metabolic pathways
vha01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VIBHAR_05785
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIBHAR_05785
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VIBHAR_05785
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vha01011
]
VIBHAR_05785
Enzymes [BR:
vha01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VIBHAR_05785
Peptidoglycan biosynthesis and degradation proteins [BR:
vha01011
]
Precursor biosynthesis
Amino acid ligase
VIBHAR_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
TTL
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ABU73679
UniProt:
A7N512
LinkDB
All DBs
Position
II:complement(969588..970577)
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AA seq
329 aa
AA seq
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MIKNILLLCGGGSSEHEISLLSANFVEQQLNLIENVSVTRVEIKNEGWVTNQGELVYLDP
NQKKLCSDNLSLDVDFIVPCIHGFPGETGDIQSMFEIAGIPYLGCGPEASSNSFNKITSK
LWYDAIGIPNTPYLFLTRNDEQAHEQALQAFDKWGKVFVKAARQGSSVGCYSVTNKQSVS
QAVNDAFGYSEQVLVEKSVKPRELEVAAYEMNGELHITKPGEVIAPDGAFYSYDEKYSTS
SHSLTEVEAKNLTEEQVEAIRVASETVFKQMNLRHLSRIDFFLTEDGEIYLNEVNTFPGM
TPISMFPKMLQNNGHKFHEFLADCINTAI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaatattcttttactatgcggtggcggctcttcagagcacgagatttcacta
ctttctgcaaactttgtagagcaacagctgaatctgattgaaaacgtgagcgttacacgc
gtagaaatcaaaaatgaaggttgggtaacaaaccaaggtgaattggtttacttagaccct
aaccagaaaaagctgtgttcagacaacctaagcctagacgttgatttcattgtcccttgt
attcatggtttccctggcgaaaccggtgacattcaatctatgtttgaaatcgcgggcatt
ccttacctaggctgtggccctgaagcaagcagcaacagcttcaacaaaatcacatctaag
ctttggtacgatgcgattggcattccgaacactccatacttattcttaacacgtaacgat
gagcaagctcatgaacaagcgttacaagcgtttgataaatggggaaaagtgtttgttaaa
gctgcacgtcaaggttcttctgttggttgttacagtgtcactaacaagcaatctgtttcc
caagctgtgaacgatgcatttggttactcagagcaagtcttggtagaaaagtcagtcaaa
cctcgtgaactcgaagttgctgcttatgagatgaacggcgagttacacattactaagcct
ggtgaagtgattgcgcctgatggtgccttctattcttacgatgagaagtacagcacgtct
agccattcactgactgaagtagaagcgaaaaacctgacagaagagcaggtggaagcgatt
cgagttgcttcggaaaccgtctttaagcaaatgaatttacgtcatttatcgcgcatcgac
ttcttcctaacagaagatggtgagatttaccttaacgaagtcaacaccttcccaggaatg
acgccaatctcgatgttcccgaaaatgctacaaaacaacggtcacaagttccatgagttc
ttagcagattgtattaatactgcaatctaa
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