Virgibacillus halodenitrificans: BME96_09285
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Entry
BME96_09285 CDS
T04548
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
vhl
Virgibacillus halodenitrificans
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
PAS_8
HTH_8
AAA_2
AAA
PAS_10
PAS_7
GFO_IDH_MocA
DapB_N
PglD_N
AAA_5
NAD_binding_7
Mg_chelatase
AAA_16
HTH_30
PAS_6
AAA_3
ThiF
Motif
Other DBs
NCBI-ProteinID:
APC48349
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Position
1784515..1786566
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AA seq
683 aa
AA seq
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MKRVLIVGAGKGGSVLLNILRATKRMHIVAIVDKDIHAEGLSLARKFNISCDNDWKQWVD
KDIDIIIEATGDDKVLDEIIETRSRKTVVIPGTVAYIIAELFNEKEELLKEIRLQMDNQN
LILNNIRDGMIVVNHTGKVDFVNRSAQEIVGLHKDEFEGKQIREVIQNSRLPIILRNKRK
EVNQKLVLENGKQIITTRIPIINADGNLQGAFAIFKDITEVVNLAEENTDLKEIKTMLEA
IIQSSDEAISVVDENGLGLMINPAYTKITGLKESDIVGAPASVDISEGESMHMKVLQTRR
AVRGVRMKVGPTNKDVYVNVAPIIVDGKIKGSVGVLHDVTEVRSLTSELKRARQIIRSLE
AKYTFDDIIGGSSEMRLALEQAKVGAKTPATVLLRGKSGTGKELFAHAIHNESDRKHNKF
IRVNCAAIAESILESELFGYEEGAFSGAKHGGKKGLFEEANFGSIFLDEIGELSLNMQAK
LLRVLQENEIVRVGGTDPITLDVRVITATNVNLEKAIMNKTFREDLYYRLNRLPIFIPSL
QERVSDLPELVHHIIVKTNQDYGKNVKSISNEALTELKKYNWPGNIRELENVIGRAMIYM
DINEEVIQLEHLPELGVTTKVSNQPTVNDLTEAQSLQLAVERYERSYIAKIFEKNNFNKT
KTAKELKISIRSLYYKLEKHQLE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtacttatcgttggggccggtaaagggggcagtgtgctcttaaacatatta
cgcgcgaccaaacgtatgcatattgttgcaatagtagacaaagacatacatgcagagggg
ttaagtcttgctagaaaatttaatatctcttgtgataatgactggaaacaatgggtagac
aaagatatagatataattattgaagcaacaggagacgataaagttcttgacgagatcata
gaaaccaggagtagaaagactgttgttattccaggtactgtagcttacataattgcggag
ctttttaatgaaaaagaagaattactaaaagaaatccgcctgcaaatggataaccaaaac
cttattctaaataatataagagatggcatgattgttgtaaatcatacaggtaaagtggac
tttgtgaatagaagtgctcaggaaattgtaggattacacaaagatgagtttgaaggtaag
caaattcgtgaagtaatccaaaattcgagacttccgattattctacgtaataaaagaaaa
gaagtcaatcaaaaattagtattggaaaacggaaagcaaataattactacaagaattcca
attatcaatgctgacggtaatttacagggtgcttttgctatattcaaggatattacagaa
gtagtaaatttggcagaagaaaatactgatctcaaggaaattaagacaatgcttgaagct
ataattcaatcctctgatgaagcaattagtgtcgttgatgaaaacggattaggcttaatg
atcaatcctgcatatacaaaaattaccggtctaaaagaatcagatatcgtcggtgcccct
gcatctgtggacatctctgaaggagagagtatgcatatgaaagtgctacagacccgcaga
gcggttagaggtgtaagaatgaaggttgggccaaccaacaaagatgtgtatgtgaacgtt
gctccaataattgtagacgggaaaattaaaggtagtgtcggggtcttgcatgatgttacg
gaagtccgctctttgacaagtgaattaaaaagagcaaggcagattattcgcagtttagaa
gcgaaatacacttttgatgatattataggtggttcgtcagagatgaggttagctttggag
caggcaaaagtaggagcgaagacccctgcaactgttcttttgagaggaaagtcgggtact
ggaaaagaattatttgcgcatgctattcacaatgaaagtgatcggaagcataataagttt
attcgagtaaactgtgcggcaattgcagaatctattttagaaagtgaattatttggttat
gaagagggagctttttccggtgcaaaacacggagggaaaaaaggtttatttgaggaagct
aattttggaagtatatttcttgatgaaataggggaattatcgttaaatatgcaggcaaaa
cttcttcgagtcttacaggagaatgaaattgtgcgcgtcggaggaactgatcctattacg
ttggatgtcagggtgattacagccacaaatgttaacttggaaaaagcaataatgaataag
acctttagggaagacttgtattatcggttaaatcgattgccaatttttattcccagcctt
caagaaagggtctcagatctccccgaactcgttcatcatattattgtgaagacaaatcag
gattatggaaaaaacgtcaaatctatatcaaatgaagcacttacggaattaaaaaaatat
aattggccgggaaatatcagggaattggagaatgtaataggtcgagcaatgatttatatg
gatattaatgaggaagttattcaattagagcatttacccgaactaggggttacaacaaaa
gtatcaaaccagcctactgtgaatgatttaactgaagcacaatctttacaactggctgta
gaaagatatgaaagaagttatattgcaaaaatatttgaaaagaacaattttaacaaaact
aaaacagctaaggaattaaaaatttcaataagaagtttatactataaattagaaaagcat
caacttgaataa
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