Virgibacillus halodenitrificans: BME96_13360 Help Entry BME96_13360       CDS       T04548                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism vhl  Virgibacillus halodenitrificans Pathway vhl03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:vhl00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BME96_13360  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vhl03400]     BME96_13360 DNA repair and recombination proteins [BR:vhl03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BME96_13360   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       BME96_13360 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N RsgA_GTPase AAA_16 AAA_29 AAA_21 nSTAND3 AAA_33 nSTAND1 AAA_23 BCA_ABC_TP_C AAA_22 AAA_18 APS_kinase Viral_helicase1 DnaJ_CXXCXGXG ATPase_2 NACHT cobW ATPase AAA_25 Septin SLFN-g3_helicase T2SSE Thioredoxin_15 Motif Other DBs NCBI-ProteinID:  APC49122 UniProt:  A0A6L8JRT4 LinkDB All DBs Position complement(2592590..2595466) Genome browser AA seq 958 aa AA seqDB search MPSKSIQIQGARAHNLKNVDVTIPKNNLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGHP TCPKHGIEISSQTVQQMVDRILEYPERTKLQILAPVVSGRKGEHVKVFEKLRQEGYVRIR VDKEMREVSEEIKLEKNKKHSIEVVVDRIVVKEGITGRLSDSIETALTLGEGKIIVDVIG EEELMFSENHACPICGFSIDELEPRLFSFNSPFGACPTCDGLGTNLEVDLDLVIPDWDKT LNEHAIAPWEPISSQYYPQLLQSVCNHFNINMDTPVKDLPKEEMDKILYGSGNEKIQFHY VNDFGKVRDNRVAFEGVLANVARRYRETSSDFIRETLEKYMAQKHCPACKGYRLKEEALA VLVNGLHISKVTDFSIVEAQDFFEHLELSEKEEKIAQMILKEICNRLEFLNNVGLDYLTL SRAAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIETLKRMRDLDNT LIVVEHDEDTMLAADWLIDIGPGAGEHGGQIVASGTPTEVMKDERSLTGQYLSGDKFIQL PSQRRKSDKRHIEVVRAEENNLKKVNAKFPIGLMTVVTGVSGSGKSTLVNEILYKSLAKE LYRGKHKPGKHKTVKGIEHIEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKG KNISDVLGLTIEEALEFFANIPKIKRKLQTIYDVGLGYIKLGQPATTLSGGEAQRVKLAS ELHRRSNGKSFYILDEPTTGLHVDDIKRLLAVLQRLVDNGDTVLIIEHNLDVIKTADHII DLGPEGGARGGQIIATGTPEEIAKKEISYTGRYLKPVLERDQQRMNNLISNKEKISAK NT seq 2877 nt NT seq  +upstreamnt  +downstreamnt atgcctagtaaaagtatacaaattcaaggcgcaagggcacataatttaaagaatgttgat gtcaccattcctaaaaataatctggtcgtacttacaggcttgtcaggatctggaaaatct tcactcgcttttgatacaatttatgcagaagggcagcggcgctatgtcgagtctctttct gcttatgcacggcaatttttagggcagatggataagccggatgtagatgccatagaggga ctatctcctgctatttctatcgaccagaagacaacgagtaagaatccaaggtcaacagta ggaacagtcacagaaatctatgattatttaagacttctatatgccagggtaggccatccc acttgtccaaagcatggaattgaaatttcttctcaaacggtccagcaaatggttgatcgc attttggaataccctgaaagaactaagctgcaaatacttgctccagttgtttccggccga aaaggtgagcatgtaaaagtatttgagaagttgcgtcaggaaggctacgtgagaataaga gtagacaaagaaatgcgagaagtatcagaagaaattaaattagagaaaaacaaaaagcac tctattgaagttgtggtggaccgtattgtagtaaaagagggaattactgggcgattgagt gactctattgagacagcacttactttgggagaaggcaagatcattgttgacgtaattggt gaagaggaattaatgtttagtgaaaatcatgcctgtcccatatgtggattctcgattgat gagttggaaccaaggttattttcattcaacagtccatttggagcatgccctacatgtgac ggattggggacaaacctggaagtagatctggatctcgtcattcctgattgggataagacg ttgaacgagcatgcaattgcaccttgggaaccaattagttctcagtattatcctcagtta ctgcaaagtgtttgcaatcattttaatataaatatggatacaccagtaaaggatcttccg aaagaagaaatggataaaattctgtatggaagcggtaatgaaaaaatccaattccattac gtaaatgatttcggtaaagttagagataatcgtgtcgcttttgaaggtgtgctagcaaat gtagctagacggtatcgtgaaacatcatctgatttcattcgtgaaaccttagaaaagtat atggcccaaaaacattgtcctgcatgtaagggataccgtttaaaggaagaagctttagcg gtactggtaaatgggctgcatattagcaaagtcactgatttctccatagtagaggctcag gacttttttgagcatttagagctaagtgaaaaggaagaaaaaattgctcaaatgatcctc aaggaaatatgtaaccggctggaatttttaaataatgtcggcttggattatctcacttta tctcgtgcagctggtacactctcgggcggagaagctcagcgtatacgcctggctactcag attgggtctgctctgacaggggttctttacgtattggatgaaccatccatcggactgcat caacgggataacgatcggcttatcgaaacattaaagcgcatgagggatctggataacacg ttaattgttgtggagcacgatgaagataccatgctggctgccgattggttaatagatatt ggtccaggtgctggggagcatggaggccaaatagtagcaagcggcacaccaacagaagta atgaaagatgagcgttctctaacaggacaatatttatctggagacaaatttattcaatta ccatctcaaagaagaaaaagtgataaacgtcatattgaagtagttagagctgaagagaat aatttaaagaaggttaatgctaaatttccaattggtctaatgaccgtagttaccggcgtt tctggttcggggaaaagtactttagtaaatgaaattttatacaaatcattagccaaggaa ttgtatcgtggcaaacataagccaggaaagcataaaacggtaaaagggatcgagcatatc gagaaggttatcgatattgaccaatcaccgattggaaggactcctcgttccaatccagca acttatacaggtgtttttgatgatatccgtgatgtttttgctcaaactaatgaagcaaag gtacgaggctataaaaaaggtcgtttcagcttcaatgttaaaggtggaagatgtgaagcc tgtcgtggcgatggaataattaaaattgaaatgcacttcttaccagatgtatatgtccct tgtgaggtttgtcatggaaaacgttacaaccgggaaaccttggaggttaaatataaagga aagaatatctctgatgtattaggactgaccattgaagaagctttggagttttttgctaat atccctaaaattaaacgtaaattgcaaactatttatgatgttggtttagggtatatcaaa ctaggacagccggcaacaacattgtcaggtggagaagcgcaacgggtgaaactcgcaagt gaattacaccgccgttccaatggaaaatccttttatattttagacgaaccgacaactggt ttacatgttgatgatattaaacggttgttagcagtccttcagcgtttagtggataatggt gatacagtgttgattattgaacataatcttgatgttatcaaaactgcagatcatattatt gacttaggaccagaaggcggagcacgtggaggacagattattgcaacaggtacaccggaa gagattgctaaaaaagaaatatcttatactggccgatatttaaaaccggtgttagaaaga gaccagcagcgaatgaataatctgatttcaaacaaagaaaaaataagtgcaaagtaa

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